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. 2010 Nov 9;104(2):376–386. doi: 10.1038/sj.bjc.6605990

Table 3. Frequently upregulated genes on chromosome 8q24.3 in bladder cancer cell lines.

      Fold change (relative to normal bladder)
Gene ID Symbol Gene name BOY J82 KK47 T24 UMUC Average
54742 LY6K Lymphocyte antigen 6 complex, locus K 40.92 34.89 41.53 20.08 5.70 28.62
8629 JRK Jerky homolog (mouse) 27.01 7.69 32.34 4.28 6.09 15.48
9401 RECQL4 RecQ protein-like 4 19.39 12.65 16.89 9.96 10.47 13.87
286077 FAM83H Family with sequence similarity 83, member H 9.91 5.43 48.10 4.50 0.22 13.63
23246 BOP1 Block of proliferation 1 19.73 6.17 16.23 6.16 11.67 11.99
65263 PYCRL Pyrroline-5-carboxylate reductase-like 18.65 8.13 15.94 5.00 9.25 11.39
80728 KIAA1688 KIAA1688 protein 14.73 8.10 18.85 6.34 6.88 10.98
4796 NFKBIL2 Nuclear factor of κ light polypeptide gene enhancer in B-cells inhibitor-like 2 16.07 5.28 13.46 6.83 10.47 10.42
286075 ZNF707 Zinc-finger protein 707 15.16 5.27 15.58 3.47 5.93 9.08
9684 LRRC14 Leucine-rich repeat containing 14 10.97 9.17 17.30 5.04 2.33 8.96
54512 EXOSC4 Exosome component 4 13.90 4.13 13.84 4.12 6.12 8.42
113655 MFSD3 Major facilitator superfamily domain containing 3 9.41 6.63 11.33 3.33 6.46 7.43
51236 C8orf30A Chromosome 8 open reading frame 30A 10.67 4.59 9.19 3.88 5.83 6.83
4061 LY6E Lymphocyte antigen 6 complex, locus E 6.02 7.31 10.70 2.07 5.74 6.37
9831 ZNF623 Zinc-finger protein 623 8.57 4.81 8.27 1.79 5.91 5.87
7264 TSTA3 Tissue-specific transplantation antigen P35B 7.25 2.93 10.85 3.47 3.72 5.64
1537 CYC1 Cytochrome c-1 7.88 3.96 9.05 1.96 4.55 5.48
23144 ZC3H3 Zinc-finger CCCH-type containing 3 7.22 2.74 9.19 2.41 4.84 5.28
28991 COMMD5 COMM domain containing 5 9.54 4.50 6.22 2.49 3.28 5.20
84875 PARP10 Poly (ADP-ribose) polymerase family, member 10 6.00 6.36 7.75 3.23 2.34 5.14
22827 PUF60 Poly-U-binding splicing factor 60 KDa 9.97 2.56 7.85 1.95 3.04 5.08
54108 CHRAC1 Chromatin accessibility complex 1 7.53 2.90 8.54 2.11 4.13 5.04
27161 EIF2C2 Eukaryotic translation initiation factor 2C, 2 9.83 1.98 6.74 1.97 3.14 4.73
84948 TIGD5 Tigger transposable element derived 5 6.12 4.47 6.86 1.61 4.33 4.68
84988 PPP1R16A Protein phosphatase 1, regulatory (inhibitor) subunit 16A 5.06 2.54 10.52 1.83 3.36 4.66
26233 FBXL6 F-box and leucine-rich repeat protein 6 6.95 2.57 7.40 2.64 3.45 4.60
2738 GLI4 GLI-Kruppel family member GLI4 8.28 2.60 5.15 1.90 4.65 4.52
55630 SLC39A4 Solute carrier family 39 (zinc transporter), member 4 10.17 3.38 2.08 3.07 0.84 3.91
6132 RPL8 Ribosomal protein L8 7.12 1.86 7.13 1.33 2.05 3.90
575 BAI1 Brain-specific angiogenesis inhibitor 1 2.50 1.52 2.20 2.53 9.78 3.71
23513 SCRIB Scribbled homologue (Drosophila) 7.46 1.81 5.32 1.56 2.35 3.70
2765 GML Glycosylphosphatidylinositol anchored molecule like protein 5.18 4.34 4.46 2.68 1.68 3.67
5747 PTK2 Protein tyrosine kinase 2 7.73 2.24 2.84 1.76 3.77 3.67
79581 GPR172A G protein-coupled receptor 172A 5.08 2.83 5.33 2.04 2.93 3.64
2875 GPT Glutamic-pyruvate transaminase (alanine aminotransferase) 3.20 3.36 2.28 3.01 6.15 3.60
7553 ZNF7 Zinc-finger protein 7 5.71 2.46 5.24 1.67 2.69 3.55
286122 C8orf31 Chromosome 8 open reading frame 31 4.01 1.86 7.06 1.62 2.38 3.39
286128 ZFP41 Zinc-finger protein 41 homolog (mouse) 6.34 3.50 3.41 2.11 1.50 3.37
81858 SHARPIN SHANK-associated RH domain interactor 5.16 2.77 4.26 1.64 2.61 3.29
114822 RHPN1 Rhophilin, Rho GTPase-binding protein 1 5.25 1.09 5.86 2.45 1.64 3.26
1E+08 UNQ601 LPPA601 3.28 1.92 5.75 1.51 3.23 3.14
79943 ZNF696 Zinc-finger protein 696 5.60 1.52 3.45 2.17 2.91 3.13
8928 FOXH1 Forkhead box H1 4.56 2.32 3.38 2.13 3.24 3.13
8733 GPAA1 Glycosylphosphatidylinositol anchor attachment protein 1 homolog (yeast) 4.50 2.32 4.44 1.22 2.55 3.01
340390 KIAA1875 KIAA1875 3.59 1.93 5.25 1.80 2.23 2.96
340371 NRBP2 Nuclear receptor-binding protein 2 4.13 2.32 4.67 1.18 2.31 2.92
116447 TOP1MT Topoisomerase (DNA) I, mitochondrial 5.50 1.15 4.17 0.97 2.56 2.87
90990 KIFC2 Kinesin family member C2 1.15 4.41 2.32 2.14 4.04 2.81
2907 GRINA Glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding) 4.50 2.51 3.57 0.73 1.52 2.57
1936 EEF1D Eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) 3.20 1.60 4.90 1.16 1.39 2.45
8694 DGAT1 Diacylglycerol O-acyltransferase homolog 1 (mouse) 3.78 1.16 3.97 0.71 2.37 2.40
7564 ZNF16 Zinc-finger protein 16 4.34 1.23 3.58 0.86 1.97 2.40
1584 CYP11B1 Cytochrome P450, family 11, subfamily B, polypeptide 1 3.01 1.91 3.00 1.48 1.92 2.27
100130274 LOC100130274 Similar to hCG1646697 3.40 1.57 2.62 1.52 1.66 2.15
58500 ZNF250 Zinc-finger protein 250 3.47 1.74 2.22 1.02 1.91 2.07
203054 ADCK5 aarF domain containing kinase 5 2.47 2.05 3.23 1.06 1.26 2.01
                 
Other LY6 family genes
137797 LYPD2 LY6/PLAUR domain containing 2 1.75 1.56 1.90 0.91 0.57 1.34
66004 LYNX1 Ly6/neurotoxin 1 1.15 0.60 1.05 0.55 1.10 0.89
57152 SLURP1 Secreted LY6/PLAUR domain containing 1 0.80 0.51 0.72 0.16 0.44 0.53
4062 LY6H Lymphocyte antigen 6 complex, locus H 0.44 0.38 0.41 0.35 0.25 0.37
8581 LY6D Lymphocyte antigen 6 complex, locus D 0.15 0.09 0.18 0.07 0.10 0.12