Table 1.
Sodium channel binding activities for the training set used in the final non-cross-validated CoMFA modela
| Compound | R1 | R2 | R3 | R4 | n | LogP | 3H-BTX IC50 (μM) | Final model, −pIC50b |
||
|---|---|---|---|---|---|---|---|---|---|---|
| Obsd | Pred | Res | ||||||||
| 1 | n-Propyl | H | H | 1.96 | 162 | −2.21 | −2.10 | −0.11 | ||
| 2 | n-Butyl | H | H | 2.46 | 103 | −2.01 | −1.91 | −0.10 | ||
| 3 | n-Butyl | H | H | 3.01 | 285 | −2.45 | −2.16 | −0.30 | ||
| 4 | n-Pentyl | H | Methyl | 2.96 | 39 | −1.59 | −1.55 | −0.04 | ||
| 5 | n-Hexyl | H | H | 3.40 | 13 | −1.11 | −1.17 | 0.06 | ||
| 6 | n-Heptyl | H | H | 3.96 | 5 | −0.70 | −0.82 | 0.12 | ||
| 7 | n-Nonyl | H | H | 4.96 | 5 | −0.70 | −0.54 | −0.16 | ||
| 8 | Methyl | Ethyl | H | 2.02 | 720 | −2.86 | −2.87 | 0.01 | ||
| 9 | 1 | 0.96 | 2112 | −3.32 | −2.87 | −0.46 | ||||
| 10 | 2 | 1.46 | 851 | −2.93 | −2.66 | −0.27 | ||||
| 11 | 3 | 1.96 | 251 | −2.40 | −2.52 | 0.12 | ||||
| 12 | 4 | 2.46 | 251 | −2.40 | −2.43 | 0.03 | ||||
| 13 | 1.52 | 250 | −2.40 | −2.46 | 0.06 | |||||
| 14 | n-Butyl | Methyl | H | H | 2.96 | 225 | −2.35 | −2.03 | −0.33 | |
| 15 | n-Butyl | H | Methyl | H | 2.96 | 58 | −1.76 | −1.78 | 0.02 | |
| 16 | n-Butyl | H | H | Methyl | 2.96 | 95 | −1.98 | −2.22 | 0.25 | |
| 17 | Cyclohexyl | H | H | H | 2.96 | 58 | −1.76 | −1.91 | 0.14 | |
| 18 | 2 | 2.01 | 700 | −2.85 | −3.11 | 0.27 | ||||
| 19 | 3 | 2.51 | 427 | −2.63 | −2.79 | 0.16 | ||||
| 20 | 3.70 | 9 | −0.95 | −0.96 | 0.01 | |||||
| 21 | 1.39 | 910 | −2.96 | −3.10 | 0.14 | |||||
| 22 | 3.86 | 5.4 | −0.73 | −0.95 | 0.22 | |||||
| 23 | 51 | −1.71 | −1.65 | −0.06 | ||||||
| 24 | 1.82 | 49 | −1.69 | −1.71 | 0.02 | |||||
| 25 | 3.77 | 1.4 | −0.15 | 0.22 | −0.37 | |||||
| 26 | 3.87 | 3.5 | −0.54 | −0.99 | 0.44 | |||||
| 27 | 3.34 | 7.1 | −0.85 | −0.81 | −0.04 | |||||
| 28 | 2.70 | 240 | −2.38 | −1.94 | −0.44 | |||||
| 29 | 2.74 | 24 | −1.38 | −1.12 | −0.26 | |||||
| 30 | 3.01 | 12.9 | −1.11 | −0.86 | −0.25 | |||||
| 31 | 2.18 | 53.7 | −1.73 | −1.81 | 0.08 | |||||
| 32 | 2.53 | 109.6 | −2.04 | −1.96 | −0.08 | |||||
| 33 | 2.42 | 2 | −0.28 | −0.72 | 0.44 | |||||
| 34 | 2.42 | 24 | −1.38 | −1.50 | 0.12 | |||||
| 35 | 3.27 | 3.4 | −0.53 | −0.73 | 0.20 | |||||
| 36 | 2.46 | 40 | −1.60 | −1.95 | 0.35 | |||||
Number of components = 4; s = 0.245; q2 = 0.926.
−pIC50 = −log IC50.