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. 2011 Feb;37(2):321–330. doi: 10.1016/j.ultrasmedbio.2010.10.019

Table 2.

Primer sequences for mouse ES pluripotency, early and late differentiation genes

Gene Oligo Sequence Product size (bp)
Nanog Forward aaaccaaaggatgaagtgcaa 141
Reverse gatgcgttcaccagatagcc
Oct4 Forward atcactcacatcgccaatca 139
Reverse ggaaaggtgtccctgtagcc
Rex1 Forward ctgggtacgagtggcagttt 117
Reverse acgtgtcccagctcttagtcc
Nestin Forward ccgcttccgctgggtcactgt 227
Reverse ctgagcagctggttctgctcct
Brachyury Forward catgtactctttcttgctgg 162
Reverse ggtctcgggaaagcagtggc
Mash1 Forward ccacggtctttgcttctgttt 266
Reverse tggggatggcagttgtaaga
Gsc Forward cagatgctgccctacatgaac 157
Reverse tctgggtacttcgtctcctgg
Fgf5 Forward tgtgtctcaggggattgtagg 136
Reverse agctgttttcttggaatctctcc
Kdr Forward tttggcaaatacaacccttcaga 112
Reverse gcagaagatactgtcaccacc
Nodal Forward ttcaagcctgttgggctctac 312
Reverse tccggtcacgtccacatctt
Gfap Forward aaaaccgcatcaccattcct 172
Reverse acgtccttgtgctcctgctt
Dcx Forward ggccaagagtttctgccaag 244
Reverse taatgcagggatcagggaca
Otx2 Forward aaggagccatgttggactgaa 184
Reverse gcctgggaatacaggagcag
Pax6 Forward ggtccatcaaccagcaacct 212
Reverse acaccggatcacctctgctt
Mitf Forward gagaaatggcggttagaagca 241
Reverse caaccacatgagcaacacaga
Nrl Forward gatggacgatgccctctcac 258
Reverse ctgggctactgataaagcacgaa
Gapdh Forward caggttgtctcctgcgactt 127
Reverse tgctgtagccgtattcattgtc
β-actin Forward ccaccatgtacccaggcatt 141
Reverse acagtgaggccaggatggag

ES = embryonic stem.