Table 2.

Empirical Type I Error Rates at α = 0.05 for the Logistic Kernel-Machine Test and Individual-SNP Analysis when Applied to SNP Sets Simulated from the ASAH1 Gene

		Logististic Kernel-Machine Test
n	Individual-SNP Analysis	Linear Kernel	IBS Kernel	Weighted IBS Kernel
1000	0.049	0.052	0.046	0.055
2000	0.048	0.047	0.053	0.052