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. Author manuscript; available in PMC: 2012 Jan 14.
Published in final edited form as: AIDS. 2011 Jan 14;25(2):143–152. doi: 10.1097/QAD.0b013e328340fdaf

Figure 2. Diversity and divergence of plasma and breast milk virus are similar.

Figure 2

A. Pairwise diversity and B. pairwise divergence from the inferred MRCA for plasma, left and right breast milk samples were calculated in MEGAv4.0 with the maximum likelihood + G correction. The median for each group of sequences is indicated with a horizontal red line. The y-axis is scaled in substitutions/site, defined as the number of nucleotide differences between two sequences divided by the sequence length. Asterisks indicate significantly different medians between tissues in the same patient (p<0.0019).