Table 4. Nearest-Neighbor Free Energy Parameters for Multibranch Loop Initiation at 37 °C.
model | parameter | value (kcal/mol) | error (kcal/mol) | p-value |
---|---|---|---|---|
eq 24 universal model | aG | 6.39 | 0.86 | 3.48 × 10−10 |
bG | −0.14 | 0.06 | 0.0216 | |
cG | 0.25 | 0.22 | 0.2659 | |
dG | 1.05 | 0.17 | 7.23 × 10−8 | |
ΔG°37,strain | 2.69 | 0.38 | 1.88 × 10−9 | |
R2 = 0.6007, p-value = 3.523 × 10−12 | ||||
eq 25 model for three-way MBL | aG′ | 8.06 | 0.39 | <2 × 10−16 |
bG′ | −0.28 | 0.06 | 2.75 × 10−5 | |
dG′ | 0.83 | 0.17 | 1.57 × 10−5 | |
ΔG°37,strain′ | 1.94 | 0.38 | 5.32 × 10−6 | |
R2 = 0.7083, p = 3.737 × 10−13 | ||||
eq 26 model for four-way MBL | aG′′ | 6.48 | 0.45 | 9.97 × 10−10 |
dG′′ | 1.36 | 0.34 | 0.0015 | |
R2 = 0.5248, p = 0.001503 |