Skip to main content
. 2010 Apr 13;42(2):168–176. doi: 10.1152/physiolgenomics.00038.2010

Table 4.

Flanking sequences and MAFs of the SNPs in this study

SNP −10 bases Allele 1 Allele 2 +10 Bases MAF
rs6972688 TCACATACAT A G TAGTTGGAGT 0.34
rs7805887 CTTTGGAAAG A G GATCTGAGTT 0.34
rs1583830 CCTGTTCAGC T C CTTGATTTGG 0.394
rs4960675 GAATGTACCC G A TGTAACCAGC 0.328
rs4960575 TGGACACACC A C GTCTCAGAAA 0.386
rs1440461 ATGTAGCCCC A G ATTCCAGGAC 0.384
rs1440458 AAGAAAAGAA T C GCCGGTCCTT 0.052
rs1440454 CTGCCTGCAG A G GTCTCAGCCA 0.386
rs2873379* ATATGGCAGA T C GGGAGTTTTA 0.269
rs1017488* CAGCTTCATC T G TAAAGCATAG 0.266
rs2698501* ACTTTTTCCA A G AGAAGAGGAT 0.274
−1910G_A* AAAGAAGAGG A G TTCATAGTTT 0.048
−1457T_C* TTTTATATTG C T TATATCATGT 0.003
rs1881691* CTGCCTTATG A C CTCTGAGGAG 0.352
−1015A_G* GGAGAACAAA A G GTTAGTGAAA 0.002
rs3823534* GGGCAGGGAG A G CAACGCGGTG 0.257
rs3734966* AGCCACACCA T C CTCCAACGGA 0.072
rs3734967* CCCACTGGCC A G GAGGTTGCAA 0.327
rs1800883* GTACCCCAGG G C CGGTCTCCTG 0.357
HTR5A starts
rs6320* TGGATTTACC T A GTGAACCTAA 0.285
42T_C* CCTCTCCACC C T CCTCCCCTTT 0.055
rs2241859* TTACTCCCCC C A ACTCCCAAAC 0.323
862G_A* GGAGTGGGGG G A AGTAAACTGG 0.024
rs2581841* GCATTTCATC T C TAGTCTATTC 0.32
rs4581000 TACTTTGAAT A C TTTATTCAAC 0.006
rs6597455 AATTGCAAGA C G TTAGGATCAT 0.344
rs732050 TTCTAATCCA T C GATTGCAATA 0.314
rs2698512 ACAGAAAGTG G A GATTTTCAAT 0.04
rs1657268 AAAGTTTGGA T C TATTATGGAC 0.388
rs6947679 AGGTTATAAA G A ATGGTAGAAA 0.097
rs1730208 GTGGATGTGC G A GAATCCAGGC 0.312
rs893112 AACAAGCAAT T C CCCGGTGGAT 0.311
rs1657278 GCTTAAACAA A C TAGAGAGATT 0.369
rs1730135 TCAGAAAACA C T CTTCACAGAC 0.364
rs1436818 ATATTTTCCA G A TTAAACATCA 0.362
rs1730182 AGAAAGCCAC G C TCTGTATCCT 0.37
rs893109 CTTAAAAAGT G A GGGAAAATAT 0.295
rs1730143 GGGACCCGCC G T CCCCTTGGCT 0.348
rs1657265 AGACATGAGA C T GTGTAGCAGA 0.238
rs893108 GCAGGGCAGC C T TGGACGTGCT 0.193

MAF, minor allele frequency.