Figure 5.

The F2-F3-β1D Simulation

(A) Normalized average number of contacts as a function of residue number for the F2-F3 domain and lipids in the F2-F3-β1D simulation. Red lines correspond to the contacts between the lipid headgroups and the F2-F3 domain, and blue lines to the contacts between the lipid tails and the protein.

(B) Snapshot, corresponding to the last frame of the simulation, of the F2-F3-β1D simulation system. The normalized average number of lipid/protein contacts was mapped onto the structure and is shown on a color scale from blue (low number of contacts) through white to red (high number of contacts).