Table 4.
HLA alleles originally mistyped in the gold standard dataset
| Population | Occurrences | 454 type | Original type | Difference(s) |
|---|---|---|---|---|
| YRI | 11 | C*02:10 | C*02:02 | 31346962 T>C |
| CHB/JPT | 10 | A*02:07 | A*02:01 | 30019048 A>T |
| JPT | 2 | C*08:03 | C*08:01 | 31346853 C>T |
| CEU | 2 | C*07:01 | C*07:02 | 31347428 C>G |
| YRI | 2 | A*66:03 | A*66:02 | 30018721 G>C |
| YRI | 2 | A*36:03 | A*36:01 | 30019043 A>G |
| JPT | 2 | A*26:02 | A*26:01 | 30018098 G>A |
| CEU | 1 | C*06:06 | C*06:02 | 31346910 A>G |
| CEU | 1 | C*05:01 | C*16:01 | 31347486 A>T |
| 31347396 A>T | ||||
| 31347522 A>T | ||||
| CEU | 1 | C*03:04 | C*03:03 | 31347355 C>T |
| JPT | 1 | C*01:03 | C*01:02 | 31347029 T>A |
| 31347036 A>T | ||||
| YRI | 1 | B*39:24 | B*39:03 | 31432177 G>A |
| CEU | 1 | B*39:06 | B*39:05 | 31432180 G>C |
| 31432185 C>G | ||||
| 31432186 C>A | ||||
| 31432187 C>G | ||||
| 31432188 C>G | ||||
| 31432495 C>A | ||||
| JPT | 1 | A*11:02 | A*11:01 | 30018566 A>G |