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. 2011 Feb 4;6(2):e14658. doi: 10.1371/journal.pone.0014658

Table 2. Oligonucleotide primers.

Name of primer Nucleotide sequence (5′-3′) Amplified fragment size Target genes in reference strain GBS reference strain
lmb130 GTTGTGAGTTTAGTAATGATAGC 840 bp lmb R268 [43]
lmb970 GATATGTCTTGTTCCGCTTG
rogB59 GCTATGATTACTACCCTTCCATTACTC 130 bp rogB 6313 [23]
rogB189 TTCGATATTCAGAGAGAGTTGACTG
rogB298 GATTCAGGCAGGTTCCCTTT 891 bp
rogB1189 CGGCTATTTGTATCGGAGGA
rogB350 GTGCAACTGCTTATCGCATAC 794 bp
rogB1144 GGTGAGCACAAAGGAGAAGAA
rogB822 TTGGTCTGAGAAGCGTATCG 131 bp
rogB953 GCAACTTTTACCAACTCGTCA
rgfB1 TCTATGGCAAAATGCTTAACG 1086 rgfBD O90R [25]
rgfD155 TCTCTAAACGTGCCTGTTGAA
rgfD89 ACGAGGAGACGAAAGTGAAT 2277 rgfDAC
rgfC CGCAAAGTTCTATGGTTCAAAA
rovS114 CAAGGTTTGAGAGAGGAGAGTCA 631 bp rovS NEM 316 [24]
rovS745 TCCTGAAGAAGTATCACCAAGTTTT
rovS82 AGCAGATGAGCACCTATCCA 146 bp
rovS228 TGAGTGTGCGCCTTAGAATG
fbsA282 CAACTTATAGGGAAAAATCCAC 123 bp fbsA 176H4A [20]
fbsA 405 AGTTAACATCGGTCTATTAGC
fbsA86 ATCAAGTCCTGTATCTGCTAT 469 bp
fbsA555rc TTCATTGCGTCTCAAACCG
fbsB354 GCGATTGTGAATAGAATGAGTG 129 bp fbsB NEM316 [18], [45]
fbsB483 ACAGAAGCGGCGATTTCATT
fbsB143 TCGGTCATAAAATAGCGTATGG 1567 bp
fbsB1710rc AAGAATTCAACGGTCGGCTTCGT
gyrA CGGGACACGTACAGGCTACT 128 bp gyrA NEM316 [45]
rgyrA CGATACGAGAAGCTCCCACA