Table 2. Oligonucleotide primers.
Name of primer | Nucleotide sequence (5′-3′) | Amplified fragment size | Target genes in reference strain | GBS reference strain |
lmb130 | GTTGTGAGTTTAGTAATGATAGC | 840 bp | lmb | R268 [43] |
lmb970 | GATATGTCTTGTTCCGCTTG | |||
rogB59 | GCTATGATTACTACCCTTCCATTACTC | 130 bp | rogB | 6313 [23] |
rogB189 | TTCGATATTCAGAGAGAGTTGACTG | |||
rogB298 | GATTCAGGCAGGTTCCCTTT | 891 bp | ||
rogB1189 | CGGCTATTTGTATCGGAGGA | |||
rogB350 | GTGCAACTGCTTATCGCATAC | 794 bp | ||
rogB1144 | GGTGAGCACAAAGGAGAAGAA | |||
rogB822 | TTGGTCTGAGAAGCGTATCG | 131 bp | ||
rogB953 | GCAACTTTTACCAACTCGTCA | |||
rgfB1 | TCTATGGCAAAATGCTTAACG | 1086 | rgfBD | O90R [25] |
rgfD155 | TCTCTAAACGTGCCTGTTGAA | |||
rgfD89 | ACGAGGAGACGAAAGTGAAT | 2277 | rgfDAC | |
rgfC | CGCAAAGTTCTATGGTTCAAAA | |||
rovS114 | CAAGGTTTGAGAGAGGAGAGTCA | 631 bp | rovS | NEM 316 [24] |
rovS745 | TCCTGAAGAAGTATCACCAAGTTTT | |||
rovS82 | AGCAGATGAGCACCTATCCA | 146 bp | ||
rovS228 | TGAGTGTGCGCCTTAGAATG | |||
fbsA282 | CAACTTATAGGGAAAAATCCAC | 123 bp | fbsA | 176H4A [20] |
fbsA 405 | AGTTAACATCGGTCTATTAGC | |||
fbsA86 | ATCAAGTCCTGTATCTGCTAT | 469 bp | ||
fbsA555rc | TTCATTGCGTCTCAAACCG | |||
fbsB354 | GCGATTGTGAATAGAATGAGTG | 129 bp | fbsB | NEM316 [18], [45] |
fbsB483 | ACAGAAGCGGCGATTTCATT | |||
fbsB143 | TCGGTCATAAAATAGCGTATGG | 1567 bp | ||
fbsB1710rc | AAGAATTCAACGGTCGGCTTCGT | |||
gyrA | CGGGACACGTACAGGCTACT | 128 bp | gyrA | NEM316 [45] |
rgyrA | CGATACGAGAAGCTCCCACA |