TABLE 1.
Pairwise protein-coding DNA sequence comparison of PRV strains
| Strain | DNA identity and basis of comparison (nt [genes])a
|
|||||
|---|---|---|---|---|---|---|
| Ka | Be | Rice | In-Fh | NIA-3 | TNL | |
| Ka | 100% | 98.7% | 99.1% | 98.5% | 98.0% | 96.4% |
| Be | 9,792 (16) | 100% | 99.8% | 99.6% | 99.8% | 97.3% |
| Rice | 3,409 (3) | 3,285 (4) | 100% | NAb | 99.8% | 95.8% |
| In-Fh* | 12,634 (9) | 5,467 (6) | NA | 100% | NA | 97.2% |
| NIA-3 | 8,871 (10) | 5,533 (4) | 3,270 (2) | NA | 100% | 96.5% |
| TNL | 5,791 (6) | 1,936 (5) | 1,131 (3) | 4,626 (2) | 1,169 (3) | 100% |
a
The percent DNA identity is shown in the top right half of the table, and the total number of nucleotides (nt) and genes (in parentheses) involved in each pairwise comparison are indicated in the lower left half of the table.
b
NA, not available.