Table 3. Comparison of genotypic statistics using the E1 gene and the molecular epidemiology window (MEW).
Window | G+C contenta | Transition/transversiona | Intergenotypic distancea,b |
Intragenotypic distancesa,c |
||||||
---|---|---|---|---|---|---|---|---|---|---|
Range | Mean | Mean RGI vs RGII | RGI |
RGII |
||||||
Range | Mean | Range | Mean | |||||||
E1 |
66.6 |
6.34 |
0.08~10.32 |
4.92 |
7.28 |
0.08~5.75 |
3.55 |
0~7.95 |
5.66 |
|
MEW | 66.1 | 6.15 | 0~11.69 | 4.97 | 8.32 | 0~5.97 | 3.49 | 0~8.71 | 6.61 |
aStatistics were determined from all sequences listed in Table 1. bThe range and mean of genetic distances (% difference) were determined by using all sequences. The mean rubella genotype I (RGI) vs. RGII was determined from all of the pairwise RGI-RGII combinations. cThe range and mean of genetic distances were determined for RGI and RGII viruses separately.