Table 2. Genome sequencing project information.
MIGS ID | Property | Term |
---|---|---|
MIGS-31 | Finishing quality | Finished |
MIGS-28 | Libraries used | Two genomic libraries: 8kb pMCL200 and fosmid pcc1Fos Sanger libraries. One 454 pyrosequence standard library |
MIGS-29 | Sequencing platforms | ABI3730, 454 GS FLX |
MIGS-31.2 | Sequencing coverage | 11.5× Sanger; 24.9x pyrosequence |
MIGS-30 | Assemblers | Newbler version 1.1.02.15, phrap |
MIGS-32 | Gene calling method | Prodigal 1.4, GenePRIMP |
INSDC / Genbank ID | CP001779 | |
Genbank Date of Release | November 19, 2009 | |
GOLD ID | Gc01145 | |
NCBI project ID | 29309 | |
Database: IMG-GEBA | 2501651197 | |
MIGS-13 | Source material identifier | DSM 12112 |
Project relevance | Tree of Life, GEBA, Medical |