Table 1. Classification and general features of R. leguminosarum bv trifolii WSM2304 in accordance with the MIGS recommendations [8].
MIGS ID | Property | Term | Evidence code |
---|---|---|---|
Classification | Domain Bacteria | TAS [5-7,9] | |
Phylum Proteobacteria | TAS [5-7,10] | ||
Class Alphaproteobacteria | TAS [5-7,11,12] | ||
Order Rhizobiales | TAS [5-7,11,13] | ||
Family Rhizobiaceae | TAS [5-7,14] | ||
Genus Rhizobium | TAS [5-7,14-18] | ||
Species Rhizobium leguminosarum bv trifolii | TAS [5-7,14,16,18,19] | ||
Strain WSM2304 | |||
Gram stain | negative | TAS [20] | |
Cell shape | rod | TAS [20] | |
Motility | motile | TAS [20] | |
Sporulation | non-sporulating | TAS [20] | |
Temperature range | mesophile | TAS [20] | |
Optimum temperature | 28°C | TAS [20] | |
Salinity | unknown | TAS [20] | |
MIGS-22 | Oxygen requirement | aerobic | TAS [20] |
Carbon source | glucose, mannitol | TAS [5-7] | |
Energy source | chemoheterotroph | TAS [20] | |
MIGS-6 | Habitat | Soil, root nodule, host | TAS [5-7] |
MIGS-15 | Biotic relationship | Free living, Symbiotic | TAS [5-7] |
MIGS-14 | Pathogenicity | none | TAS [20] |
Biosafety level | 1 | TAS [21] | |
Isolation |
Trifolium polymorphum root nodule |
TAS [22] | |
MIGS-4 | Geographic location | Glencoe Research Station, INIA, Uruguay |
TAS [22] |
MIGS-5 | Sample collection time | December 1st, 1998 | TAS [22] |
MIGS-4.1 MIGS-4.2 | Latitude – Longitude | -56 -31.41 |
TAS [22] |
MIGS-4.3 | Depth | 5cm soil depth | NAS [2] |
MIGS-4.4 | Altitude | 130m | TAS [22] |
Evidence codes - IDA: Inferred from Direct Assay (first time in publication); TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [23]. If the evidence code is IDA, then the property was directly observed for a living isolate by one of the authors or an expert mentioned in the acknowledgements