Table 1. Classification and general features of G. bronchialis 3410T according to the MIGS recommendations [27].
MIGS ID | Property | Term | Evidence code |
---|---|---|---|
Current classification | Domain Bacteria | TAS [28] | |
Phylum Actinobacteria | TAS [29] | ||
Class Actinobacteria | TAS [30] | ||
Order Actinomycetales | TAS [30] | ||
Suborder Corynebacterineae | TAS [30,31] | ||
Family Gordoniaceae | TAS [30] | ||
Genus Gordonia | TAS [3,30,32] | ||
Species Gordonia bronchialis | TAS [1] | ||
Type strain 3410 | TAS [1] | ||
Gram stain | positive | TAS [1] | |
Cell shape | short rods in compact grouping (cord-like) | TAS [1] | |
Motility | non-motile | TAS [1] | |
Sporulation | non-sporulating | TAS [1] | |
Temperature range | grows at 28°C and 37°C, not at 45°C | TAS [1] | |
Optimum temperature | probably between 28°C and 37°C | TAS [1] | |
Salinity | 2.5% | TAS [33] | |
MIGS-22 | Oxygen requirement | obligate aerobe | TAS [1] |
Carbon source | mono- and disaccharides | TAS [1] | |
Energy source | chemoorganotroph | TAS [3] | |
MIGS-6 | Habitat | human | TAS [1] |
MIGS-15 | Biotic relationship | free living | NAS |
MIGS-14 | Pathogenicity | opportunistic pathogen | TAS [1,17-20] |
Biosafety level | 2 | TAS [34] | |
Isolation | sputum from human with pulmonary disease in (probably) Japan |
TAS [1] | |
MIGS-4 | Geographic location | global | TAS [1,17-20] |
MIGS-5 | Sample collection time | 1971 or before | TAS [1] |
MIGS-4.1 MIGS-4.2 | Latitude, Longitude | not reported | |
MIGS-4.3 | Depth | not reported | |
MIGS-4.4 | Altitude | not reported |
Evidence codes - IDA: Inferred from Direct Assay (first time in publication); TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from of the Gene Ontology project [35]. If the evidence code is IDA, then the property was directly observed for a live isolate by one of the authors or an expert mentioned in the acknowledgements.