Table 1. Classification and general features of E. medicae WSM419 according to the MIGS recommendations [16].
MIGS ID | Property | Term | Evidence code |
---|---|---|---|
Current classification | Domain Bacteria | TAS [17] | |
Phylum Proteobacteria | TAS [18] | ||
Class Alphaproteobacteria | TAS [19,20] | ||
Order Rhizobiales | TAS [20,21] | ||
Family Rhizobiaceae | TAS [22,23] | ||
Genus Ensifer | TAS [1,2,24-27] | ||
Species Ensifer medicae | TAS [1,2,11,24-28] | ||
strain WSM419 | |||
Gram stain | negative | TAS [29] | |
Cell shape | rod | TAS [29] | |
Motility | motile | TAS [29] | |
Sporulation | non-sporulating | TAS [29] | |
Temperature range | mesophile | TAS [29] | |
Optimum temperature | 28°C | TAS [29] | |
Salinity | unknown | ||
MIGS-22 | Oxygen requirement | aerobic | TAS [29] |
Carbon source | galactose, arabinose, glutamate | TAS [9,13] | |
Energy source | chemoorganotroph | TAS [9,13] | |
MIGS-6 | Habitat | Soil, root nodule, host | TAS [9] |
MIGS-15 | Biotic relationship | Free living or symbiotic | TAS [9] |
MIGS-14 | Pathogenicity | none | TAS [16] |
Biosafety level | 1 | TAS [30] | |
Isolation | Medicago murex root nodule | TAS [9] | |
MIGS-4 | Geographic location | Forestry Station 7 km south of Tempio, Sardinia, Italy |
TAS [9] |
MIGS-5 | Nodule collection date | May 1st, 1981 | TAS [31] |
MIGS-4.1 MIGS-4.2 |
Longitude Latitude |
9.101915 40.888925 |
TAS [31] |
MIGS-4.3 | Depth | <10 cm | TAS [31] |
MIGS-4.4 | Altitude | 350m | TAS [31] |
Evidence codes - IDA: Inferred from Direct Assay (first time in publication); TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [32]. If the evidence code is IDA, then the property was directly observed for a living isolate by one of the authors or an expert mentioned in the acknowledgements.