Table 1. Classification and general features of R. leguminosarum bv. trifolii WSM1325 according to the MIGS recommendations [8].
MIGS ID | Property | Term | Evidence code |
---|---|---|---|
Current classification | Domain Bacteria | TAS [9] | |
Phylum Proteobacteria | TAS [10,11] | ||
Class Alphaproteobacteria | TAS [12,13] | ||
Order Rhizobiales | TAS [13,14] | ||
Family Rhizobiaceae | TAS [15,16] | ||
Genus Rhizobium | TAS [17-19] | ||
Species Rhizobium leguminosarum | TAS [18,20] | ||
Biovar trifolii Strain WSM1325 | |||
Gram stain | negative | TAS [17] | |
Cell shape | rod | TAS [17] | |
Motility | motile | TAS [17] | |
Sporulation | non-sporulating | TAS [17] | |
Temperature range | mesophile | TAS [17] | |
Optimum temperature | 28°C | TAS [17] | |
Salinity | unknown | TAS [17] | |
MIGS-22 | Oxygen requirement | aerobic | TAS [17] |
Carbon source | glucose, mannitol, glutamate | TAS [5-7] | |
Energy source | chemoorganotroph | ||
MIGS-6 | Habitat | Soil, root nodule, host | TAS [5-7] |
MIGS-15 | Biotic relationship | Free living, Symbiotic | TAS [5-7] |
MIGS-14 | Pathogenicity | none | NAS [17] |
Biosafety level | 1 | TAS [21] | |
Isolation | Root nodule | TAS [22] | |
MIGS-4 | Geographic location | Livadi beach, Serifos, Cyclades, Greece |
TAS [22] |
MIGS-5 | Nodule collection date | April 1993 | TAS [22] |
MIGS-4.1 MIGS-4.2 |
Longitude Latitude |
24.518901 37.147034 |
TAS [22] |
MIGS-4.3 | Depth | not reported | NAS |
MIGS-4.4 | Altitude | 2m | TAS [22] |
Evidence codes - TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from http://www.geneontology.org/GO.evidence.shtml of the Gene Ontology project [23]. If the evidence code is IDA, then the property was directly observed by one of the authors or an expert mentioned in the acknowledgements.