Table 2. Genome sequencing project information for R. leguminosarum bv trifolii WSM1325.
MIGS ID | Property | Term |
---|---|---|
MIGS-31 | Finishing quality | Finished |
MIGS-28 | Libraries used | Four genomic libraries: three Sanger libraries - 2 kb pTH1522, 8 kb pMCL200 and fosmid pcc1Fos and one 454 pyrosequence standard library |
MIGS-29 | Sequencing platforms | ABI3730xl, 454 GS FLX |
MIGS-31.2 | Sequencing coverage | 16× Sanger; 20× pyrosequence |
MIGS-30 | Assemblers | Newbler version 1.1.02.15, phrap |
MIGS-32 | Gene calling method | Prodigal |
Genbank ID | CP001622 (Chomosome) a CP001623 (pR132501) b CP001624 (pR132502) c CP001625 (pR132503) d CP001626 (pR132504) e CP001627 (pR132505) f |
|
Genbank Date of Release | May 7, 2009 | |
GOLD ID | Gc01039 g | |
NCBI project ID | 20097 | |
Database: IMG | 641736174 (draft) h | |
Project relevance | Symbiotic nitrogen fixation, agriculture |
a http://www.ncbi.nlm.nih.gov/nuccore/240856645; b http://www.ncbi.nlm.nih.gov/nuccore/240861211
c http://www.ncbi.nlm.nih.gov/nuccore/240861949; d http://www.ncbi.nlm.nih.gov/nuccore/240862574
e http://www.ncbi.nlm.nih.gov/nuccore/240863069; fhttp://www.ncbi.nlm.nih.gov/nuccore/240863376
g http://genomesonline.org/GOLD_CARDS/Gc01039.html
h http://img.jgi.doe.gov/cgi-bin/pub/main.cgi?section=TaxonDetail&page=taxonDetail&taxon_oid=641736174