Table 2. Real-time PCR amplification of wild-type and deleted mtDNA from mitochondria collected after laser-induced fluorescence detection.
No. of mtDNA moleculesa | Total PicoGreen signal | Deleted mtDNA (%)b | No. of collected mitochondria |
---|---|---|---|
0 | 0.00 | 100.0 | 0 |
0 | 0.00 | 100.0 | 0 |
0 | 0.00 | 0.0 | 0 |
0 | 0.00 | 100.0 | 0 |
3 | 0.06 | 0.0 | 1 |
3 | 0.03 | 100.0 | 1 |
3 | 0.06 | 0.0 | 1 |
4 | 0.07 | 0.0 | 2 |
6 | 0.06 | 100.0 | 2 |
7 | 0.12 | 0.0 | 1 |
8 | 0.08 | 100.0 | 2 |
8 | 0.14 | 0.0 | 3 |
10 | 0.18 | 0.0 | 2 |
10 | 0.18 | 0.0 | 2 |
10 | 0.18 | 0.0 | 3 |
11 | 0.11 | 100.0 | 1 |
18 | 0.17 | 100.0 | 2 |
18 | 0.18 | 100.0 | 3 |
20 | 0.35 | 0.0 | 1 |
23 | 0.23 | 100.0 | 5 |
24 | 0.23 | 100.0 | 6 |
25 | 0.31 | 66.7 | 6 |
27 | 0.26 | 100.0 | 8 |
28 | 0.27 | 100.0 | 2 |
28 | 0.46 | 18.2 | 6 |
35 | 0.34 | 100.0 | 4 |
38 | 0.37 | 100.0 | 7 |
39 | 0.69 | 0.0 | 2 |
40 | 0.59 | 39.7 | 9 |
42 | 0.27 | 100.0 | 5 |
46 | 0.45 | 100.0 | 3 |
50 | 0.49 | 100.0 | 5 |
57 | 0.64 | 84.1 | 7 |
58 | 1.05 | 0.0 | 7 |
59 | 0.58 | 100.0 | 7 |
73 | 0.72 | 100.0 | 6 |
79 | 1.04 | 59.3 | 7 |
83 | 0.97 | 76.4 | 6 |
88 | 0.87 | 100.0 | 4 |
90 | 0.91 | 97.1 | 8 |
100 | 1.80 | 0.0 | 5 |
101 | 1.00 | 100.0 | 4 |
107 | 1.29 | 73.3 | 8 |
122 | 1.20 | 100.0 | 13 |
126 | 1.25 | 98.9 | 12 |
146 | 2.62 | 0.0 | 9 |
148 | 2.66 | 0.0 | 11 |
154 | 1.52 | 100.0 | 3 |
157 | 1.70 | 87.8 | 7 |
170 | 1.92 | 82.1 | 9 |
175 | 1.73 | 100.0 | 12 |
181 | 3.26 | 0.0 | 1 |
192 | 2.24 | 78.0 | 11 |
208 | 2.18 | 92.1 | 12 |
209 | 3.76 | 0.0 | 2 |
210 | 2.07 | 100.0 | 9 |
239 | 2.57 | 88.6 | 16 |
295 | 3.45 | 77.4 | 8 |
415 | 4.46 | 88.8 | 21 |
420 | 4.37 | 93.0 | 5 |
430 | 4.27 | 98.9 | 11 |
537 | 6.44 | 73.6 | 12 |
615 | 6.06 | 100.0 | 10 |
617 | 6.61 | 89.4 | 7 |
664 | 7.47 | 82.8 | 7 |
808 | 8.99 | 84.3 | 15 |
811 | 8.25 | 95.8 | 29 |
822 | 8.56 | 92.9 | 32 |
988 | 17.78 | 0.0 | 8 |
1,516 | 16.62 | 86.3 | 46 |
1,818 | 20.35 | 83.4 | 64 |
2,001 | 22.16 | 84.9 | 64 |
Mitochondria were isolated from ΔH2-1 cybrid cells, harboring a heteroplasmic mtDNA deletion, and labeled with PicoGreen. Mitochondria were hydrodynamically mobilized through a capillary and detected on-column using laser-induced fluorescence. Mitochondria were then collected from the outlet of the capillary, and real-time PCR was performed to amplify the wild-type and deleted mtDNA. Of the collected samples, 35% were PCR negative
The number of total mtDNA molecules was determined using Eq. 2
Italics indicate samples displaying heteroplasmy