Table 3.
Replication genotyping results.
SNP | Chromosome | Position | Gene | MAF | Family p-value (unaffectedness criteria) | Replication case-control p-value | Meta-analysis p-value | |
---|---|---|---|---|---|---|---|---|
Permissive | Strict | |||||||
rs4671825 | 2 | 67762350 | 0.47 | 0.186 | 0.008 | 0.639 | 0.099 | |
rs4671826 | 2 | 67762453 | 0.47 | 0.137 | 0.008 | 0.640 | 0.084 | |
rs13358880 | 5 | 56845056 | 0.14 | 0.204 | 0.041 | 0.196 | 7.1E-05 | |
rs4389663 | 5 | 104451583 | 0.17 | 0.166 | 0.047 | 0.918 | 0.130 | |
rs10981870 | 9 | 115462097 | 0.34 | 0.137 | 0.047 | 0.449 | 0.022 | |
rs4924281 | 15 | 36742939 | 0.27 | 0.011 | 0.034 | 0.363 | 0.001 | |
rs1495186 | 15 | 36778748 | C15ORF53 | 0.23 | 0.015 | 0.043 | 0.045 | 0.009 |
rs903530 | 15 | 36786340 | 0.23 | 0.010 | 0.054 | 0.033 | 0.012 | |
rs2643217 | 15 | 36791055 | 0.23 | 0.008 | 0.057 | 0.033 | 0.004 | |
rs2012353 | 19 | 37591133 | DPY19L3 | 0.17 | 0.116 | 0.030 | 0.349 | 0.106 |