Table 1.
Open loop |
Closed loop |
||||||
---|---|---|---|---|---|---|---|
Residue | Dihedrals | Min | Max | Δ | Min | Max | Δ |
SER | φ | –168 | –120 | 48 | –159 | –110 | 49 |
ψ | –25 | 45 | 70 | 134 | 176 | 42 | |
ω | 143 | 205 | 62 | 160 | 205 | 45 | |
χ1 | –178 | 178 | 356 | –29 | –210 | 181 | |
ALA | φ | 25 | 98 | 73 | –166 | –118 | 48 |
ψ | 5 | 68 | 63 | –41 | 15 | 56 | |
ω | 144 | 195 | 51 | 147 | 193 | 46 | |
VAL | φ | 100 | 214 | 114 | 39 | 96 | 57 |
ψ | –61 | 82 | 143 | 108 | 176 | 68 | |
ω | 153 | 212 | 59 | 155 | 200 | 45 | |
χ1 | –103 | 102 | 205 | –99 | –42 | 57 | |
GLY | φ | –163 | –58 | 105 | –175 | –92 | 83 |
ψ | –36 | 87 | 123 | –71 | 8 | 79 | |
ω | 151 | 215 | 64 | 154 | 205 | 51 | |
ASN | φ | –101 | –32 | 69 | –175 | –93 | 82 |
ψ | 92 | 152 | 60 | –3 | 62 | 65 | |
ω | 158 | 204 | 46 | 170 | 219 | 49 | |
χ1 | 145 | 195 | 50 | –101 | –34 | 67 | |
χ2 | 33 | 126 | 93 | 83 | 245 | 162 | |
ALA | φ | –89 | –43 | 46 | 25 | 91 | 66 |
ψ | –67 | –15 | 52 | 124 | 178 | 54 | |
ω | 152 | 195 | 43 | 155 | 202 | 47 | |
GLU | φ | –137 | –87 | 50 | 165 | 236 | 71 |
ψ | –36 | 10 | 46 | 1 | 77 | 76 | |
ω | 161 | 199 | 38 | 148 | 208 | 60 | |
χ1 | –78 | –28 | 50 | –180 | –29 | 151 | |
χ2 | 55 | 121 | 66 | 137 | 223 | 86 | |
χ3 | –152 | 164 | 316 | –180 | 180 | 360 | |
SER | φ | –137 | –87 | 50 | 165 | 235 | 70 |
ψ | –10 | 29 | 39 | 144 | 190 | 46 | |
ω | 164 | 186 | 22 | –175 | –150 | 25 | |
χ1 | –83 | –29 | 54 | 172 | 220 | 48 |
αk(min), αk(max), and Δαk are defined in Eq. 10; their values were calculated from samples of 1000 loop conformations generated for the open and closed microstates by retaining a conformation every 2 ps from the corresponding 2 ns trajectories.