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Validation of genome-wide SNPs on an array. The genomic DNA of Omachi (A) and Nipponbare (B) was analyzed with an array consisting of 731 selected SNPs using the Illumina Bead Station 500G system. The numbers of SNPs in blue and gray boxes represent matched and mismatched sequences of Omachi (A) and Nipponbare (B), respectively. White boxes represent the number of SNPs without signals.
