Table 2. Number of genes revealing significant positive selection in the CodeML analysis for lineage 3 and lineage 4.
CodeML results a | |||
Lineage 3 | Total | M2a vs. M1a (p<0.05) | M2a vs. M1a (p<0.01) |
All core genes | 1096 | 62 | 34 |
Genes with dn/ds ≥0.25 | 133 | 29 | 20 |
Lineage 4 | |||
All core genes | 1090 | 26 | 14 |
Genes with dn/ds ≥0.25 | 86 | 12 | 8 |
All genes for which model M2a (PositiveSelection) fitted the data significantly better than model M1a (NearlyNeutral) for two different p-values.