TABLE 6.
Sequence comparisons of the three novel supernumerary subunits of complex I from P. denitrificans with other species
Multiple sequence alignment of complex I subunits from P. denitrificans and species listed was performed with ClustalW2 (53). The names of homologous bovine subunits are shown in parentheses. GI accession numbers for strain Pd 1222 are also shown. Sequence identity (and similarity in parentheses) was calculated compared with P. denitrificans sequences.
| P. denitrificans | R. sphaeroides | Human | Bovine | Yarrowia lipolytica | Neurospora crassa |
|---|---|---|---|---|---|
| % | % | % | % | % | |
| PdNUMM (13 kDa) gi 119384591 | 56 (73) | 27 (44) | 29 (44) | 21 (35) | 24 (37) |
| PdNUYM (AQDQ) gi 119384054 | 64 (77) | 35 (55) | 35 (54) | 29 (48) | 12 (25) |
| PdN7BM (B17.2) gi 119384012 | 69 (81) | 31 (45) | 31 (45) | 23 (37) | 21 (34) |