Table 3.
kinetic constant | Ref. | kinetic constant | Ref. | kinetic constant | Ref. | kinetic constant | Ref. |
---|---|---|---|---|---|---|---|
k1 = 10+9 | [31]h | k18 = 5.80·10-3 | [31] | k35 = 30 | [44] | k52 = 10+5 | e |
k2 = 10 | [31]h | k19 = 0.10 | [20] | k36 = 30 | [44]a | k53 = 100 | [44] |
k3 = 10+8 | [31]h | k20 = 4.80·10+5 | [20] | k37 = 621 | [8]b | k54 = 100 | [44]a |
k4 = 10-4 | [31]h | k21 = 10-4 | [20] | k38 = 7.23·10+6 | [40,63]h | k55 = 394 | [64]b |
k5 = 5.00·10+8 | [16,31]h | k22 = 2.40·10+5 | [20] | k39 = 0.10 | [63]h | k56 = 3.85·10-5 | f |
k6 = 10-4 | [31]h | k23 = 2.00·10-4 | [20] | k40 = 0.013 | [63] | k57 = 3.85·10-5 | f |
k7 = 30 | [31]h | k24 = 5.80·10-3 | [31] | k41 = 30 | [44] | k58 = 0.002 | e |
k8 = 0.10 | [31]h | k25 = 0.10 | [20] | k42 = 10+5 | e | k59 = 0.002 | e |
k9 = 3.30·10-4 | [65] | k26 = 4.8·10+4 | [40,63]h | k43 = 100 | [44] | k60 = 2.67·10-6 | [43] |
k10 = 4.80·10+5 | [20] | k27 = 0.10 | [63]h | k44 = 100 | [44]a | k61 = 1 | [13]c |
k11 = 10-4 | [20] | k28 = 0.013 | [63] | k45 = 207 | [8]b | k62 = 4.90·10-5 | [21]d |
k12 = 2.40·10+5 | [20] | k29 = 30 | [44] | k46 = 8.60·10+6 | [19,63]h | k63 = 10+8 | g |
k13 = 2.00·10-4 | [20] | k30 = 30 | [44]a | k47 = 0.10 | [63]h | k64 = 10+8 | [31] |
k14 = 4.80·10+5 | [20] | k31 = 621 | [8]b | k48 = 0.013 | [63] | k65 = 5.00·10+8 | [16,31] |
k15 = 10-4 | [20] | k32 = 9.10·10+5 | [40,63]h | k49 = 30 | [44] | k66 = 0.10 | [20] |
k16 = 2.40·10+5 | [20] | k33 = 0.10 | [63]h | k50 = 30 | [44]a | k67 = 0.10 | [20] |
k17 = 2.00·10-4 | [20] | k34 = 0.013 | [63] | k51 = 1182 | [64]b |
Units on k: first order reactions: sec-1, second order reactions: M-1sec-1, third order reactions: M-2sec-1, fourth order reactions: M-3sec-1, fifth order reactions: M-4sec-1.
a Scale parameter of the gamma distributed event (sec).
b Shape parameter of the gamma distributed event.
c kcat of Michaelis Menten kinetics.
d KM of Michaelis Menten kinetics.
e Rate adjusted to give 20 protein molecules per mRNA transcript.
f Rate adjusted for 5 hours half life.
g Rate adjusted for very fast reaction.
h Rate calculated through equilibrium constant by assuming the forward and calculating the reverse rate.