Table 1.
Sample information of the 33 strains of Francisella spp. included in the current study.
| Strain name | Year | Host | Location |
|---|---|---|---|
| F. noatunensis subsp. noatunensis | |||
| FnnR-001/04 (GM2212) | 2004 | Atlantic cod (Gadus morhua), farmed | Rogaland county |
| NCIMB 14265T | 2005 | Atlantic cod (G. morhua), farmed | Hordaland county |
| FnnR-017/05 | 2005 | Atlantic cod (G. morhua), farmed | Rogaland county |
| FnnC-UA2660A | 2006 | Farmed Atlantic salmon (Salmo salar) | Region X Chile |
| FnnR-002/06 | 2006 | Atlantic cod (G. morhua), farmed | Rogaland county |
| FnnR-003/06W | 2006 | Atlantic cod (G. morhua), wild caught | Rogaland county |
| FnnR-004/06 | 2006 | Atlantic cod (G. morhua), farmed | Rogaland county |
| FnnMR-005/06 | 2006 | Atlantic cod (G. morhua), farmed | Møre og Romsdalen county |
| FnnN-006/06 | 2006 | Atlantic cod (G. morhua), farmed | Nordland county |
| FnnH-007/06 F | 2006 | Atlantic cod (G. morhua), farmed | Hordaland county |
| FnnH-008/06W | 2006 | Atlantic cod (G. morhua), wild caught | Rogaland/Hordaland county |
| FnnH-014/06F | 2006 | Atlantic cod (G. morhua), farmed | Hordaland county |
| FnnAA-009/07W | 2007 | Atlantic cod (G. morhua), wild caught | Aust Agder |
| FnnVA-010/07W | 2007 | Atlantic cod (G. morhua), wild caught | Vest-Agder |
| FnnMR-011/07 | 2007 | Atlantic cod (G. morhua), farmed | Møre og Romsdalen county |
| FnnSF-012/07 | 2007 | Atlantic cod (G. morhua), farmed | Sogn og Fjordane county |
| FnnMR-013/07 | 2007 | Atlantic cod (G. morhua), farmed | Møre og Romsdalen county |
| FnnMR-015/08F | 2008 | Atlantic cod (G. morhua), farmed | Møre og Romsdalen county |
| FnnH-016/08 F | 2008 | Atlantic cod (G. morhua), farmed | Hordaland county |
| FnnSF-018/09 | 2009 | Atlantic cod (G. morhua), farmed | Sogn og Fjordane county |
| FnnSF-019/09 | 2009 | Atlantic cod(G. morhua), farmed | Sogn og Fjordane county |
| FnnH-020/09 | 2009 | Atlantic cod (G. morhua), farmed | Hordaland county |
| F. noatunensis subsp. orientalis | |||
| FnoJ-001/02 (Ehime-1)B | 2002 | Farmed Three-line grunt (Parapristipoma trilineatum) | Ehime prefecture, Japan |
| FnoI-002/04C | 2004 | Farmed tilapia (Oreochromis spp.) | Lake Toba, Indonesia |
| FnoI-003/05C | 2005 | Farmed tilapia (Oreochromis spp.) | Lake Toba, Indonesia |
| FnoI-004/07C (Ind04) | 2007 | Farmed tilapia (Oreochromis spp.) | Lake Wadaslingtan, Indonesia |
| F. philomiragia | |||
| FpDSM7535T | 1959 | Muskrat from Bear River refuge | Utah, USA |
| FpCCUG19701 | 1960 | Water, from a river in Bear River refuge | Utah, USA |
| FpCCUG13404 | 1979 | Human, bone marrow | Zurich, Switzerland |
| FpCCUG12603 | 1982 | Human, abscess | Gøteborg, Sweden |
| Fp1951D | 2003 | Human, blood | Denmark |
| Fp080107 -IE | 2007 | Environmental sample direct isolation | Marthas Vineyard, USA |
| Fp080107 -IIE | 2007 | Environmental sample after passage through a mice | Marthas Vineyard, USA |
The table show source and geographical location of isolation for the Francisella isolates (n = 33) included in the current study. Norway is country of origin unless otherwise is stated.
Isolates were kindly provided by Intervet Norbio ASA, Dr. KamaishiB, Intervet SingaporeC, Dr. Friis-MøllerD and Dr. BerradaE
Isolated from broodfishF, Isolated in ChileA, W = wild caught, T = type strain