Table 2.
Attributes of the Variable Number of Tandem Repeat loci among F. noatunensis isolates.
| Marker locus | GenBank Accesion no | Repeat sequence | Repeats in GM2212 | Amplicon/repeat span | No. alleles |
|---|---|---|---|---|---|
| Fnn-VNTR1NA | GU385767 | TTAAGGTA | 7 | 195-219/5-8 | 3 |
| Fnn-VNTR2 | GU385768 | AGTTATT | 8 | 217-392/8-33 | 7 |
| Fnn-VNTR3NA | GU385769 | TAGAT | 10 | 197-212/7-10 | 4 |
| Fnn-VNTR4 | GU385770 | TTGTGG | 10 | 311-437/10-31 | 11 |
| Fnn-VNTR5NA | GU385771 | AAAAGGTAT | 5 | 285-312/2-5 | 2 |
| Fnn-VNTR6 | GU385772 | CTG | 10 | 295-307/8-12 | 3 |
| Fnn-VNTR7 | GU385773 | TTTTA | 5 | 404-435/1.8-5 | 4 |
GenBank Accession numbers refer to sequences of the F. noatunensis ssp. noatunensis GM2212 isolate. Repeat sequence, number of repeats and amplicon size is that of the GM2212 isolate.
Not amplified within F. philomiragia isolatesNA