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. 2011 Jan 18;42(1):7. doi: 10.1186/1297-9716-42-7

Table 1.

Details of the nested and hemi-nested PCR protocols used to screen deer blood samples for the presence of Babesia spp.

PCR protocol Primers (positions)* Amplification protocol Reference
I 1st PCR:
Product size*: BTH-1F (365-385) 5'cct gag aaa cgg cta cca cat ct 94°C: 10 min, [23]
561 bp BTH-1R (1031-1050) 5' ttg cga cca tac tcc ccc ca 40 cycles: 95°C: 30 s, 68°C: 1 min, 72°C: 1 min
72°C: 10 min
nested PCR:
GF2 (466-487) 5' gtc ttg taa ttg gaa tga tgg 94°C: 10 min [19]
GR2 (1006-1026) 5' cca aag act ttg att tct ctc 40 cycles: 95°C: 30 s, 60°C: 1 min, 72°C: 1 min
72°C: 10 min
II 1st PCR:
Product size*: Babfor (959-977) 5'gac tag gga ttg gag gtc 94°C: 10 min [24]
576 bp Babrev (1589-1610) 5'gaa taa ttc acc gga tca ctc 35 cycles: 95°C: 1 min, 53°C: 1.5 min, 72°C: 1.5 min
72°C: 10 min
nested PCR
BT2-F (1035-1055) 5'gga gta tgg tcg caa gtc tg 94°C: 10 min [23]
Babrev 35 cycles: 95°C: 1 min, 53°C: 1.5 min, 72°C: 1.5 min
72°C: 10 min

* product sizes and primer positions according to reference sequence AY046576