Table 2.
List of the 55 genes induced in all treatments
| Fold change | ||||||||
|---|---|---|---|---|---|---|---|---|
| Gene | Putative function | R1 | B | TS | PQ | MM | MM-C | MM-N |
| MGG_02239.6 | Unknown | 107.6 | 132.2 | 4.5 | 4.6 | 2.0 | 20.5 | 3.0 |
| MGG_07868.6 | Endo-1,4-beta-xylanase | 86.8 | 387.5 | 4.4 | 4.6 | 2.6 | 39.6 | 4.2 |
| MGG_04404.6 | Pisatin demethylase | 39.8 | 52.6 | 3.8 | 6.9 | 3.2 | 11.8 | 8.1 |
| MGG_01941.6 | FAD binding domain-containing protein | 28.8 | 34.0 | 2.5 | 5.2 | 2.2 | 4.2 | 3.7 |
| MGG_04522.6 | Unknown | 22.1 | 68.1 | 9.5 | 11.6 | 7.1 | 17.3 | 12.2 |
| MGG_05798.6 | Cutinase (1E-32) | 20.2 | 53.1 | 3.3 | 3.0 | 2.3 | 8.1 | 5.4 |
| MGG_08527.6 | Nucleoside-diphosp-sugar epimerase (2E-86) | 18.5 | 33.6 | 2.3 | 3.5 | 2.1 | 4.2 | 5.4 |
| MGG_05954.6 | Glycoside hydrolase family 79 protein (2E-21) | 16.9 | 49.9 | 9.0 | 2.6 | 6.7 | 9.1 | 4.2 |
| MGG_01863.6 | Aminopeptidase Y | 16.6 | 34.4 | 2.4 | 2.7 | 2.0 | 8.6 | 8.9 |
| MGG_08583.6 | Beta-glucosidase 1 precursor | 15.9 | 27.4 | 2.5 | 2.3 | 2.2 | 3.2 | 2.6 |
| MGG_02225.6 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | 15.3 | 22.7 | 5.2 | 5.5 | 4.5 | 4.9 | 4.3 |
| MGG_05565.6 | Glutathione S-transferase | 14.2 | 29.9 | 5.5 | 4.8 | 3.5 | 7.9 | 5.5 |
| MGG_14657.6 | SAM-dependent methyltransferase (3E-29) | 11.8 | 22.4 | 2.8 | 2.5 | 2.7 | 5.0 | 12.2 |
| MGG_08985.6 | Beta-xylosidase | 9.3 | 58.5 | 4.6 | 3.9 | 2.4 | 17.7 | 9.3 |
| MGG_09867.6 | N-acetyltransferase ats1 | 8.2 | 9.5 | 4.7 | 4.6 | 4.5 | 3.4 | 2.6 |
| MGG_05912.6 | N-acyl-L-amino acid amidohydrolase | 8.0 | 48.7 | 3.7 | 27.5 | 2.1 | 4.9 | 20.7 |
| MGG_00039.6 | Ketose-bisphosphate aldolase class-II (2E-117) | 7.8 | 8.8 | 4.0 | 4.0 | 3.9 | 4.4 | 5.3 |
| MGG_03900.6 | Aldehyde dehydrogenase | 7.7 | 23.0 | 3.2 | 4.1 | 3.4 | 9.1 | 3.7 |
| MGG_09433.6 | Endoglucanase family 5 glycoside hydrolase | 7.7 | 38.7 | 3.3 | 4.8 | 2.9 | 7.6 | 3.2 |
| MGG_02409.6 | Non-specific lipid-transfer protein | 7.3 | 30.2 | 2.2 | 2.2 | 2.1 | 8.2 | 2.2 |
| MGG_06747.6 | Glutathione S-transferase | 6.9 | 8.0 | 3.6 | 3.6 | 3.1 | 17.2 | 2.4 |
| MGG_02559.6 | MOSC domain-containing protein | 6.8 | 42.3 | 2.8 | 2.7 | 2.1 | 11.0 | 4.4 |
| MGG_09757.6 | Neutral alpha-glucosidase ab | 6.4 | 17.8 | 2.6 | 3.9 | 2.5 | 6.8 | 5.7 |
| MGG_01843.6 | Phosphatidylethanolamine-binding protein | 5.4 | 31.7 | 2.2 | 2.1 | 2.0 | 5.1 | 3.1 |
| MGG_10518.6 | (R)-benzylsuccinyl-CoA dehydrogenase | 5.2 | 18.2 | 2.6 | 3.2 | 2.6 | 5.8 | 3.3 |
| MGG_09602.6 | Membrane copper amine oxidase | 5.1 | 7.3 | 4.5 | 3.6 | 4.2 | 4.6 | 2.1 |
| MGG_06586.6 | Quinone oxidoreductase | 5.1 | 4.5 | 2.2 | 2.7 | 2.2 | 2.9 | 6.3 |
| MGG_13518.6 | Sorbose reductase SOU1 | 5.0 | 6.4 | 3.1 | 3.3 | 2.6 | 7.1 | 9.6 |
| MGG_07933.6 | Dihydrodipicolinate synthase | 4.9 | 10.6 | 2.8 | 8.4 | 2.7 | 6.3 | 12.3 |
| MGG_04164.6 | DUF427 domain-containing protein | 4.7 | 28.1 | 7.3 | 7.0 | 6.4 | 12.3 | 5.3 |
| MGG_09218.6 | Dehydrogenase/reductase SDR family member 4 | 4.6 | 12.8 | 3.2 | 2.5 | 2.7 | 4.3 | 2.5 |
| MGG_00663.6 | Phytanoyl-CoA dioxygenase family protein | 4.6 | 20.1 | 5.2 | 5.2 | 3.7 | 5.6 | 7.8 |
| MGG_01920.6 | C2H2 type zinc finger domain protein | 4.6 | 18.6 | 4.0 | 5.7 | 3.5 | 6.4 | 5.9 |
| MGG_01772.6 | Thioesterase family protein (1E-23) | 4.3 | 7.9 | 3.5 | 2.5 | 3.4 | 4.1 | 2.1 |
| MGG_09352.6 | Minor extracellular protease vpr | 4.2 | 8.7 | 9.7 | 8.3 | 7.9 | 5.0 | 4.3 |
| MGG_07629.6 | Flavin-binding monooxyg-like protein (0.0) | 4.0 | 6.7 | 2.7 | 3.6 | 2.6 | 4.4 | 2.9 |
| MGG_14087.6 | Glucan 1,3-beta-glucosidase | 3.8 | 6.0 | 3.7 | 4.3 | 3.6 | 6.9 | 2.8 |
| MGG_07627.6 | Homoserine acetyltransferase family protein | 3.7 | 10.0 | 3.3 | 3.9 | 3.2 | 12.0 | 15.3 |
| MGG_08554.6 | Amidohydrolase family protein | 3.7 | 9.5 | 3.8 | 4.3 | 3.5 | 3.4 | 4.6 |
| MGG_13765.6 | Serine carboxypeptidase S28 protein (6E-163) | 3.7 | 14.3 | 3.6 | 4.3 | 3.4 | 11.1 | 12.1 |
| MGG_01081.6 | Peroxin 14/17 | 3.5 | 9.1 | 3.6 | 2.6 | 3.2 | 3.9 | 2.0 |
| MGG_06386.6 | Unknown | 3.1 | 33.5 | 2.2 | 2.4 | 2.2 | 11.5 | 5.9 |
| MGG_06784.6 | Aldo-keto reductase | 3.0 | 19.4 | 3.3 | 2.0 | 3.2 | 6.7 | 6.6 |
| MGG_03095.6 | Dihydroxyacetone kinase | 3.0 | 19.1 | 3.6 | 3.7 | 3.3 | 3.5 | 4.7 |
| MGG_02330.6 | Extracellular serine-rich protein (6E-23) | 2.9 | 4.8 | 7.2 | 4.8 | 3.3 | 3.8 | 4.9 |
| MGG_02169.6 | Unknown | 2.9 | 7.0 | 2.5 | 4.2 | 2.1 | 3.9 | 6.6 |
| MGG_09979.6 | Monooxygenase | 2.8 | 7.4 | 3.2 | 3.0 | 3.0 | 4.2 | 2.4 |
| MGG_03094.6 | Triosephosphate isomerase 2 | 2.7 | 8.2 | 2.9 | 2.9 | 2.4 | 2.1 | 2.1 |
| MGG_11530.6 | MFS transporter (2E-89) | 2.7 | 16.2 | 2.6 | 2.7 | 2.6 | 4.4 | 14.9 |
| MGG_08306.6 | Abhydrolase domain-containing protein 12 | 2.4 | 8.2 | 3.2 | 2.1 | 2.6 | 4.5 | 4.1 |
| MGG_15269.6 | DUF636 domain-containing protein | 2.2 | 10.8 | 2.9 | 4.2 | 3.0 | 5.9 | 4.8 |
| MGG_07761.6 | Unknown | 2.2 | 4.0 | 4.7 | 5.4 | 4.0 | 4.8 | 2.7 |
| MGG_08611.6 | FAD dependent oxidoreductase (4E-87) | 2.1 | 4.5 | 2.3 | 3.0 | 2.3 | 3.2 | 2.6 |
| MGG_07665.6 | Unknown | 2.1 | 5.5 | 2.9 | 2.3 | 2.8 | 13.2 | 11.9 |
| MGG_01316.6 | Unknown | 2.1 | 14.8 | 8.3 | 4.3 | 6.5 | 7.0 | 13.3 |
1list sorted in descending fold-change in the rice treatment. R: rice at 72 hpi; B: barley at 72 hpi; TS: temperature up shift, PQ: Paraquat, MM: minimal medium, MM-C: carbon limitation, MM-N: nitrogen limitation. The adjusted P-values for these genes are < 0.01.