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. 2011 Jan 26;12:67. doi: 10.1186/1471-2164-12-67

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Copyright ©2011 Hammond et al; licensee BioMed Central Ltd.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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Genomic landscape of CHO contigs. CHO consensus sequences for A) DHFR and B) Alppl2 genes aligned to mouse reference chromosomes. Grey bars represent nucleotides identical to the reference sequence and red bars represent both nucleotides that differ from the reference sequence and gaps in the consensus sequences. CHO contigs aligned to an Alppl2 exon (highlighted in green in B) shown at the C) chromosome and D) nucleotide level. Red nucleotides indicate differences between the CHO consensus and reference sequences. Consensus sequences aligned to the mouse reference genome using BLAT [30] at the UCSC Genome Browser [31].