Table 2.
Contig Size | ||||||||
---|---|---|---|---|---|---|---|---|
Reference | Total | < 100 bp | 100 to 500 bp | > 500 bp | ||||
Size (bp) | % GC | Size (bp) | % GC | Size (bp) | % GC | Size (bp) | % GC | |
Mouse | 54 | 43.0 | 46 | 42.9 | 140 | 44.0 | 637 | 45.2 |
Rat | 53 | 42.9 | 46 | 42.8 | 139 | 44.2 | 616 | 46.5 |
The average size and average GC content of CHO contigs generated from reference-guided alignment