Table 1. Anaerobic induction sites in the DAN/TIR regulon.
Gene |
ORF |
|
Sites |
|
(A) AR1 sites | ||||
DAN1 | YJR150C | AR1a | TCGTTAGAG | –495 to –487 |
AR1b | TCGTTT-AG | –412 to –405 | ||
AR1c | TCGTAT-AG (←) | –197 to –204 | ||
AR1d | TCGTTC-AG | –180 to –173 | ||
DAN2 | YLR037C | TCGTTC-AG | –447 to –440 | |
DAN3 | YBR301W | TCGTTC-AG (←) | –425 to –432 | |
TCGTTCAAG | –234 to –226 | |||
DAN4 | YJR151C | TCGTTC-AG | –195 to –188 | |
TIR1 | YER011W | TCGTAT-AG (←) | –520 to –527 | |
TCGTTTAAG | –350 to –342 | |||
TIR2 | YOR010C | TCGTAA-AG | –374 to –367 | |
TIR3 | YIL011W | TCGTTT-AG (←) | –853 to –860 | |
TIR4 | YOR009W | TCGTTC-AG (←) | –734 to –741 | |
TCGTTT-AG (←) | –215 to –222 | |||
Consensus | TCGTTYAG | |||
(B) AR2 sites | ||||
DAN1 | YJR150C | AR2a | AAAAATTGTTGA | –561 to –550 |
AR2b | AAAAATTGATGA | –318 to –307 | ||
DAN2 | YLR037C | ATAAATTGTTGA (←) | –142 to –153 | |
DAN3 | YBR301W | CAAAAATGTTGA (←) | –571 to –581 | |
Consensus | AAAAATTGTTGA |