Skip to main content
. Author manuscript; available in PMC: 2011 Oct 1.
Published in final edited form as: Mol Immunol. 2010 Aug 5;47(16):2611–2618. doi: 10.1016/j.molimm.2010.05.291

Table 2B.

The pattern of SHM is altered in p53 −/− mice

1 2 3 4 5 6 7 8 9 10 11
Mouse wt1 p53−/−1 wt2 p53−/−2 wt3 p53−/−3 wt
ung+ (a)
ung−/− p53+/−
ung−/−
p53−/−
ung−/− 1
p53−/−
ung−/− 2
A mut %(a) 32 72 33 50 30 45 36 31 34 30 30
A-G %(b) 13 22 15 25 14 23 17 15 20 13 15
2+4+6 > 1+3+5 p4×10−4(c) 10+11 = 8+9 p0.13
A-C %(b) 11.8 22.2 9.5 13.2 7.3 11.1 7 7.9 7.4 6.8 8.7
A-T %(b) 6.5 28 8.5 11 8.7 11 11.6 7.6 6.9 10.3 6.1
2+4+6>1+3+5 p0.06(d) 10+11 = 8+9 p0.38
C-T %(b) 5 0 10 7 7 11 10 14 14 19 18
8+9+10+11>1+3+5+7 p8.5×10−8(g)
C-A %(b) 4.6 0 2.6 0 5.5 1.9 1.1 2.6 3.2 0.2 0.5
2+4+6< 1+3+5 p0.01(e) 10+11 < 8 + 9 p8×10−4(e)
C-G %(b) 1.3 0 2.6 3.3 4.6 1.1 3.9 0 0 0.3 0.5
G-A %(b) 9 6 15 10 15 7 14 30 26 29 20
2+4+6<1+3+5 p0.01(f) 10+11 = 8+9 p0.41
8+9+10+11>1+3+5+7 p3.4×10−13(g)
G-C %(b) 13.7 11.1 7.9 7.7 6.4 7.4 6 0.7 0.5 0.5 1
G-T %(b) 9.8 0 3.7 5.5 4.1 1.9 4.9 0.3 0 1.1 0
2+4+6<1+3+5 p0.03(h) 10+11 = 8+9 p0.37
T mut % (a) 25.1 11.5 25.3 17.3 25 23.9 23.7 20.6 21.5 19.7 29.7
T-C %(b) 12 6 11 3 14 12 10 8 16 8 17
T-A %(b) 8.5 5.5 9 6.6 7.3 7.8 7.7 7.3 3.2 6.8 7.1
T-G %(b) 4.6 0 5.3 7.7 3.7 4.1 6 5.3 2.3 4.9 5.6
A/T(i) 1.26 6.5 1.29 2.81 1.25 1.85 1.52 1.48 1.82 1.49 1.02
C/G(j) 0.34 0 0.58 0.43 0.75 0.84 0.58 0.59 0.68 0.63 0.9
Age 16 weeks 16 weeks 11 weeks 11 weeks 8 weeks 8 weeks 8 weeks 8 weeks 8 weeks 8 weeks 8 weeks
(a)

Proportion of total mutations that were at A or at T

(b)

Proportion of total mutations that were the respective changes

(c)

The increase in A-G in the three p53 −/− mice (#2, 4, 6) compared with their wt littermates is highly significant (Fisher's exact test).

(d)

The increase in A-T in the three p53 −/− mice (#2, 4, 6) compared with their wt littermates is borderline signficant. The increase in A-C mutations is not significant (p0.16)

(e)

The decrease in C-A in the three p53 −/− mice (#2, 4, 6) and two p53 −/−ung−/− mice (#10, 11) compared with their p53 -wt littermates is significant

(f)

The decrease in G-A in the three p53 −/− mice (#2, 4, 6) compared with their wt littermates is significant

(g)

C-T and G-A transitions are significantly different between all ung −/− mice and all wt mice

(h)

The decrease in G-T in the three p53 −/− mice (#2, 4, 6) compared with their littermates is significant

(i)

% mutations at A/% mutations at T

(j)

% mutations at C/% mutations at G

Bold: mutations in p53 −/− mice are significantly different (> or <) from p53 -wt