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. 2011 Feb 14;6(2):e16623. doi: 10.1371/journal.pone.0016623

Table 6. Minimal Critical Region in the two groups of patients.

MCR (localization by aCGH) Patients Size (Mb) Possible genes
t-AML
−1q44 <241.94–247.19> t-2, t-13 5.25 >25 genes among them SMYD3
−3p14.1p12.3 <69.67–79.19> t-5, t-17 9.52 MITF FOXP1 EIF4E3 GRP27 PROK2 RYBP
SHQ1 PPP4R2 PDZRN3 CNTN3 FAM86D
FRG2C ZNF717 ROBO2 ROBO1
−5q31.3q33.1 <142.91–148.19> t-1, t-2, t-4, t-5 5.28 ADRB2 DPYSL3 HTR44 POU4F3 PPP2R2B
SPINK1 JAKMIP2 TCERG1 SPINK5 LARS
RBM27 KCTD16 HMHB1 FBXO38 YIPF5
SPINK7SCGB3A2 GPR151 PRELID2
SH3RF2 PLAC8L1 STK32A SPINK6 SPINK9
+6q27<168.12–168.32>[1.50] t-9, t-17 0.20 KIF25 FRMD1 HGC 6.1.1
−7p22.2 <3.02–3.12> t-5, t-6, t-7, t-9, t-10 0.10 GNA12 CARD11
+7p15.2 <27,15–27,18> t-14, t-16, t-17, t-19 0,03 HOXA6 HOXA7 HOXA9 HOXA10 miR-196b
−7q21.3 <97.69–101.88> t-2, t-5, t-6, t-7, t-9, 4.19 NPTX2 LMTK2 BRI3 BAIAP2L1 BHLHB8 CUX1
t-10 miR-86 miR-93miR-106b miR-548o
−7q33q34<135.74–137.48> t-2, t-5, t-6, t-7, t-8, t-9 1.74 CHMR2 PTN DGK1 CREB3L2 miR-490
+8q24.3 <143.73–143.9> t-3, t-14 0.17 PSCA LY6D JRK C8orf55 LY6K
SLURP1 LYNX1 LYPD2
−12p13.2p13.1<11.82–13.33> t-2, t-4, t-5 1.51 ETV6 CDKN1B CREBL2 EMP1 GPR19 LRP6
GPRC5A HEBP1DDX47 MANSC1 GPRC5D
KIAA1467 BCL2L14 DUSP16 APOLD1 GSG1
HTR7P miR-613 miR-614 miR1244
+17q21.3 <22.80–78.65> t-15, t-24 55.85 Whole 17q
−21q22.1 <35.11–35.15> t-7, t-8, t-11, t-29 0.04 RUNX1
p-AML
+1q21q22<153.19–154.64> p-23, p-24 1.4 >25 genes EFNA4 R1AP1 DPM3
YY1AP1 DAP3 ROBLD3 CCT3 CLK2
+1q32.1q44<201.31–247.19> p-6, p-23 45.69 Numerous genes
−3p21.3<44.20–49.02> p-21, p-24, p-32 5.18 >40 genes SMARCC1 NCKIPSD
−7q31.2q36.3<115.49–158.78> p-1 and p-2, p-7 43.29 Numerous genes
−9q22.3q31.1<93.92–103.96> p-18, p-21 9.81 >60genes FANCC XPA
Amp 21q21.1<14.29–17.97> [5.46] p-4, p-21 3.78 LIPI ABCC13 RBM11 HSPA13 SAMSN1
NRIP1 USP25 C21orf34 CXADR BTG3
miR-99a miR-125b-2hsa-let-7c
Amp 21q22.2<38.27–43.54> [3 & 5.2] p-4, p-21, p-24 5,25 DSCR4 KCNJ15 ERG ETS2 BRWD1
other genes
+21q22.3qter<43.54–46.91> p-4, p-21, p-24 7.49 >50 genes

Column 1, the location of the MCR that follows the rules of tables 4 and 5; the figures in brackets and in bold are the ratios of the amplified regions. Column 2, patients; the figures in bold indicate the smaller CNA.