Table 3.
Performance comparison on 5618 Euk-mPLoc protein dataset
| Subnuclear location | size | GO-TLM | ||
|---|---|---|---|---|
| SP | SE | MCC | ||
| Acrosome | 17 | 0.9286 | 0.7647 | 0.8422 |
| Cell | 53 | 0.8085 | 0.7170 | 0.7593 |
| Centriole | 64 | 0.8958 | 0.6719 | 0.7737 |
| Chloroplast | 501 | 0.9681 | 0.9681 | 0.9650 |
| Cyanelle | 85 | 1.0000 | 0.9882 | 0.9940 |
| Cytoplasm | 1060 | 0.6356 | 0.7983 | 0.6475 |
| Cytoskeleton | 74 | 0.2500 | 0.0877 | 0.1431 |
| Endoplasmic | 364 | 0.7453 | 0.7790 | 0.7461 |
| Endosome | 89 | 0.6591 | 0.3867 | 0.4999 |
| Extracell | 640 | 0.7895 | 0.6402 | 0.7034 |
| Golgi | 254 | 1.0000 | 0.9231 | 0.9607 |
| Hydrogenosome | 13 | 0.7872 | 0.5968 | 0.6825 |
| Lysosome | 80 | 1.0000 | 0.4615 | 0.6789 |
| Melanosome | 13 | 0.6000 | 0.3103 | 0.4295 |
| Microsome | 31 | 0.9349 | 0.8865 | 0.9020 |
| Mitochondrion | 535 | 0.8071 | 0.8145 | 0.7689 |
| Nucleus | 1333 | 0.9412 | 0.8696 | 0.9032 |
| Peroxisome | 97 | 0.8059 | 0.7781 | 0.7658 |
| Plasma | 725 | 0.9260 | 0.8410 | 0.8694 |
| Spindle pole | 36 | 0.8750 | 0.4118 | 0.5995 |
| Synapse | 15 | 1.0000 | 0.5385 | 0.7334 |
| Vacuole | 102 | 0.9176 | 0.8571 | 0.8851 |
| Overall Accuracy | 80.38% | |||
| Baseline: Euk-mPLoc model | 67.40% | |||
| Baseline: Fuzzy K-NN model | 62.25% | |||