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. 2001 Feb 1;29(3):831–840. doi: 10.1093/nar/29.3.831

Table 1. Geometrical parameters of the T-form of d(CCCTAA)a.

Base
χ (°)
P (°)
Buckle (°)
Propeller twist (°)
C1 –146 ± 10 131 ± 50 29 ± 8 –175 ± 7
C2 –125 ± 8 58 ± 6 3 ± 3 –168 ± 3
C3 –123 ± 4 53 ± 12 4 ± 3 –177 ± 3
T4 –128 ± 11 31 ± 14 –2 ± 5 –180 ± 4
A5
–105 ± 40
100 ± 45
–8 ± 12
136 ± 58
Step
Rise (Å)
Helical twist (°)
 
 
C1–C2 6.9 ± 0.4 25 ± 4    
C2–C3 6.1 ± 0.2 19 ± 5    
C3–T4 6.4 ± 0.3 27 ± 3    
T4–A5 6.1 ± 0.2 –8 ± 10    

aThe parameters were computed with the Curves 5.3 program (30), using the definitions therein. The values are the average ± standard deviation obtained for the seven lowest-energy structures: The χ and P parameters were obtained from 28 deoxyriboses, and the other helical parameters were from 14 parallel duplexes.