Table 1.
Strain | Genome size (Mb)1 | TCS genes2 | Origin |
---|---|---|---|
Lactobacillus acidophilus NCFM | 1.99 | 16 | Human isolate [61] |
L. brevis ATCC 367 | 2.35 | 21 | Fermented plant material [62] |
L. casei BL23 | 3.08 | 33 | Uncertain origin [63] |
L. casei ATCC 334 | 2.95 | 33 | Cheese (ATCC3) |
L. delbrueckii subsp. bulgaricus ATCC 11842 | 1.86 | 12 | Yogurt (ATCC) |
L. delbrueckii subsp. bulgaricus ATCC BAA-365 | 1.86 | 14 | French starter culture (ATCC) |
L. fermentum IFO 3956 | 2.10 | 12 | Fermented plant material [64] |
L. gasseri ATCC 33323 | 1.89 | 10 | Human isolate (DSMZ4) |
L. helveticus DPC 4571 | 2.08 | 8 | Swiss cheese isolate [65] |
L. johnsonii NCC533 | 1.99 | 18 | Human isolate [66] |
L. plantarum WCFS1 | 3.34 | 28 | Human saliva isolate [67] |
L. reuteri DSM 20016 | 2.00 | 17 | Human intestinal isolate (DSMZ) |
L. reuteri JCM 1112 | 2.04 | 19 | Human fecal isolate [64] |
L. sakei 23 K | 1.88 | 18 | Meat isolate [68] |
L. salivarius UCC118 | 2.13 | 16 | Human ileal-caecal isolate [69] |
Leuconostoc citreum KM20 | 1.9 | 13 | Kimchi [70] |
Lc. mesenteroides subsp. mesenteroides ATCC 8293 | 2.07 | 19 | Olive fermentation (ATCC) |
Oenococcus oeni PSU-1 | 1.78 | 12 | Wine isolate [71] |
Pediococcus pentosaceus ATCC 25745 | 1.83 | 17 | Fermented plant material [72] |
1 Values calculated including plasmids.
2 Number of genes encoding either a RR or a HK (putative pseudogenes are not considered).
3 American Type Culture Collection
4 Deutsche Sammlung von Mikroorganismen und Zellkulturen