Table 3. Expression of members of the Py235 family and two control genes determined by RNA-Seq.
GeneID | PY01365-KO geomean | WTgeomean | KO/WTratio |
PY05995 | 224.35 | 159.56 | 1.41 |
PY04438 | 375.55 | 290.44 | 1.29 |
PY05995/PY03534 | 285.07 | 242.87 | 1.17 |
PY03534 | 296.67 | 280.52 | 1.06 |
PY06018 | 492.73 | 470.69 | 1.05 |
PY05054 | 739.29 | 725.4 | 1.02 |
PY01185 | 345.7 | 346.1 | 1.00 |
PY02104 | 9.85 | 9.9 | 0.99 |
PY04930 | 278.96 | 280.66 | 0.99 |
PY06381 | 1 | 1.01 | 0.99 |
PY00649 | 189.27 | 194.45 | 0.97 |
PY03184 | 397.21 | 424.47 | 0.94 |
PY02033 | 255.2 | 278.54 | 0.92 |
PY04630 | 225.25 | 255.74 | 0.88 |
PY03432 | 281.15 | 347.29 | 0.81 |
PY01365 | 1.12 | 398.3 | 0.00 |
PY04764* | 301.64 | 328.15 | 0.92 |
PY05711* | 1947.33 | 1772.46 | 1.10 |
The expression is the geometric mean of the mapping RNA-Seq reads for each parasite line. * erythrocyte binding protein (PY04764) and β-tubulin (PY05711).