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. 2011 Feb 17;7(2):e1001293. doi: 10.1371/journal.ppat.1001293

Figure 5. Virus recombination obscures compartmentalization of SIV env sequences.

Figure 5

Diagrams indicating the positions of predicted recombination breakpoints in compartmentalized monkeys AX89, AX93 and C179 and non-compartmentalized monkey, DA2D. Recombination effects were determined by G.A.R.D. analysis as described. Breakpoint partitions are indicated as vertical lines between inverted triangles. SIV env regions with significant compartmentalization as determined by the partitioned SM test on partitioned sequences, P<0.0002 are highlighted in red boxes.