Table 1.
Method | c-Myc genomic copy number | c-Myc amount exoRNA* | c-Myc amount exoDNA* |
---|---|---|---|
D425 | |||
FISH† | > 25 | ||
250K SNP‡ | 15 | ||
qPCR | 8 ± 3.6 | 8 ± 2.0 | 13 ± 0.2 |
D384 | |||
250K SNP | 25 | ||
qPCR | 12 ± 4.7 | 42 ± 22 | 25 ± 3.7 |
D458 | |||
250K SNP | 17 | ||
qPCR | 17 ± 3.0 | 45 ± 11 | 10 ± 0.6 |
NS224 | |||
250K SNP | 2 | ||
qPCR | 2 | 0.8 ± 0.3 | 4.2 ± 0.1 |
GBM11/5 | |||
qPCR | 2 | 2.8 ± 1.4 | 0.4 ± 0.1 |
HF19 | |||
qPCR | 2 | 1 | 1 |
Reverse transcribed exoRNA (2.5 ng) and exoDNA (10 ng) were used as template for qPCR. All values were normalized to GAPDH mRNA.
FISH, Fluorescence in situ hybridization of metaphase chromosome spread60.
See representative heat map Supplementary Figure S5c.