Table 1. Position, orientation, length and att core sequences of the prophages in the IL1403 chromosome.
Phage |
Start |
End |
Genome size
(bp) |
att core sequence |
Sequence accession number |
bIL285 | 1 036 549 | 1 072 086 | 35 538 | TTTTTCATG | AF323668 |
bIL286 | 1 457 116 | 1 415 283 | 41 834 | ACTCCCCTCGCCTCCATTGAATGGATTTTATAGAATCCAAT AGTATTAGAAATCGCTCAATAGAGCGGTTTTTGTTTTCT | AF323669 |
bIL309 | 447 143 | 484 092 | 36 949 | CGAGGTTTGGCACCATGATCCGAGGGGGA | AF323670 |
bIL310 | 49 863 | 34 907 | 14 957 | CAAAAAAACACTGATTGAATGCCGTATG | AF323671 |
bIL311 | 2 011 247 | 2 025 756 | 14 510 | AAACTGTCTATTCTATTATATa | AF323672 |
bIL312 | 502 595 | 517 773 | 15 179 | GAAAGACGCAGTTAAATAATTATAGCTAT | AF323673 |
abIL311 being non-inducible, a putative att core sequence has been determined by searching for perfect direct repeats on the chromosome sequence in the vicinity of the phage genome.