Table 2. DNA homology within groups of phages, according to their virulent or temperate status.
Host |
Phages |
Group |
Phage way of life |
Length of genome homology between pairs of
phages within a group (%)a |
L.lactis | bIL285, bIL286, bIL309, r1t, Tuc2009 | P335 | temperate/lytic | 10–33 |
bIL310, bIL311, bIL312 | temperate | 7–10 | ||
bIL67, c2 | c6A | virulent | 90 | |
bIL170, sk1 | 936 | virulent | 92 | |
S.thermophilus | 7201, DT1, O1205, Sfi11, Sfi19, Sfi21 | temperate/lytic | 27–93 | |
B.subtilis | B103, phi-29, PZA | virulent | 86–100 | |
Mycobacterium | D29, L5 | temperate/lytic | 86 | |
E.coli | T3, T7 | virulent | 82 | |
933W, H-19B, HK022, HK97, λ, N15, P22, VT2-Sa | lambdoid | temperate | 0–91 | |
186, P2 | temperate | 59 |
aPairs of phage within the group were compared using BLAST 2 sequences (14), and homology was expressed by the ratio (length of homology × 100)/total length of the shorter genome.
Accession numbers are as follows: 186, U32222; 7201, AF145054; 933W, AF125520; B103, X99260; bIL67, L33769; bIL170, AF009630; bIL285, bIL286, bIL309, bIL310, bIL311 and bIL312, this paper; c2, L48605; D29, AF022214; DT1, AF085222; H-19B, AF034975; HK022, AF069308; HK97, AF069529; L5, Z18946; λ, J02459; N15, AF064539; O1205, U88974; P2, AF063097; P22, AF217253; phi-29, M14430, V01155, M14782; PZA, M11813; r1t, U38906; Sfi11, AF158600; Sfi19, AF115102; Sfi21, AF115103; sk1, AF011378; T3, X17255; T7, V01146; Tuc2009 (G.Fitzgerald and D.van Sinderen, personal communication); VT2-Sa, AP000363.