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Repetitive sequences in the Jatropha genomic sequences
| Repeat type | Jatropha genomic sequences |
||
|---|---|---|---|
| Number of elements | Coverage (kb) | Percentage of sequence | |
| Class I | |||
| LINEs | 195 | 136.9 | 0.05 |
| LTR: Copia | 31 740 | 22 318.2 | 8.03 |
| LTR: Gypsy | 67 658 | 56 655.7 | 19.60 |
| LTR: other | 13 454 | 6436.6 | 2.23 |
| Total class I | 113 047 | 86 447.4 | 29.91 |
| Class II | |||
| Coding class II | 5709 | 4102.9 | 1.42 |
| MITE | 5980 | 1802.8 | 0.62 |
| Total class II | 11 689 | 5905.7 | 2.04 |
| Short tandem repeats | 2092 | 148.1 | 0.05 |
| Unclassified | 25 977 | 14 953.3 | 5.17 |
