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Linkage Disequilibrium (LD) scores of Statistically Significant SNPs Identified in the Same Gene or chromosome
| chromosome | Comparison | SNP1 | SNP2 | D' | LOD | r2 |
|---|---|---|---|---|---|---|
| 7 | ETB vs PPD + | rs10487416 | rs10488286 | 0.406 | 3.08 | 0.148 |
| 4 | Any TB vs PPD + | rs2107005 | rs509423 | 0.345 | 0.95 | 0.043 |
PPD + = Purified protein derivative positive
ETB = Extrapulmonary tuberculosis
Any TB = Pulmonary or extrapulmonary tuberculosis
