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. 2011 Jan 31;4:28. doi: 10.1186/1756-0500-4-28

Table 3.

Linkage Disequilibrium (LD) scores of Statistically Significant SNPs Identified in the Same Gene or chromosome

chromosome Comparison SNP1 SNP2 D' LOD r2
7 ETB vs PPD + rs10487416 rs10488286 0.406 3.08 0.148
4 Any TB vs PPD + rs2107005 rs509423 0.345 0.95 0.043

PPD + = Purified protein derivative positive

ETB = Extrapulmonary tuberculosis

Any TB = Pulmonary or extrapulmonary tuberculosis