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. 2011 Jan 25;11:20. doi: 10.1186/1471-2229-11-20

Table 2.

Conserved motifs found in ZIFL protein sequences.

Motif Width Assign Amino acid sequence
1 50 MFSa NWPLMSSIILYCVFSFHDMAYSEIFSLWAESDRKYGGLSFSSEDVGQVLA
2 50 MFSa QPAEKYPNVFSEKSIFGRFPYFLPCLCISVFAAVVLISCIWLPETLHKHK
3 41 No hit LPISSLFPFLYFMIRDLHVAKREEDIGFYAGFVGASYMIGR
4 50 MFSa LQNNAVPQDQRGTANGIATTAMSFFKAIAPAGAGVLFSWAQKRQHAAFFP
5 50 MFSa GASLLVYQLFIYPWVHKVLGPINSSRIAAILSIPILCTYPFMTHLSGPWL
6 50 MFSa RFLLGALNGMLGPIKAYSIEVCRPEHQALGLSIVSTAWGIGLVVGPAIGG
7 29 MFSa PVIVFSIFSVVIFNTLFGLSTKYWMAITT
8 21 No hit HDGCPGCAMERRKEEHKGIPY
9 15 MFSa ASIFWGIVADRIGRK
10 28 No hit GDQMVFFMLNVTEVIGLMLTFKPFLAVP
11 21 No hit VLNIASMMKNNLAVTIITGTN
Ab 21 No hit NSVEALEEHLMDPNEEENENE
Bb 15 No hit IKRIKELPSQQAYWD
Cb 11 No hit EELEAQVGGSN

aMFS (Major Facilitator Superfamily Antiporter)

bAnalysis performed with whole set of ZIF proteins (68 sequences)