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. 2010 Dec 17;11(2):168–178. doi: 10.1111/j.1567-1364.2010.00703.x

Table 1.

Kluyveromyces lactis putative pfam00026 aspartyl proteases

GenBank™accession Locus tag Protein length (a.a.) SP cleavage site* GPI omega site Closest S. cerevisiae homolog blastpe-value
XP_454126 KLLA0E03938g 589 Ala-18 Gly-562 Yps1p 7.5 e-122
XP_456066 KLLA0F22088g 558 Ala-19 ND Yps7p 8.8 e-80
XP_453761 KLLA0D15917g 511 Cys-18 Gly-490 Bar1p 1.2 e-84
XP_453326 KLLA0D05929g 409 Ala-25 ND Pep4p 3.6 e-161
XP_453136 KLLA0D01507g 515 Ala-29 ND Yps6p 3.6 e-11
*

Putative signal peptide cleavage sites were predicted using signalp 3.0 (Bendtsen et al., 2004).

Putative glycosylphosphatidylinositol (GPI) anchor attachment (omega) sites were predicted using the big-pi predictor (Eisenhaber et al., 1999).

blastp searches were performed at the SGD website (http://yeastgenome.org). The presented e-values reflect homology to the closest Saccharomyces cerevisiae protein sequence.

ND, not defined.