Table 3.
Spearman's rank correlation (r) of the marker order for the comparison among the three population-specific B. napus maps, BnaSNDH_05_2010a, BnaSGDH_03_2010a and BnaDYDH_05_2010a, comparison between each of the three population-specific maps and each of the two integrated maps, BnaWAIT_01_2010a generated by JoinMap and BnaWAIT_01_2010b generated by MergeMap and comparison between the two integrated maps, BnaWAIT_01_2010a and BnaWAIT_01_2010b.
| LG | Map | BnaSNDH_05_2010a | BnaSGDH_03_2010a | BnaDYDH_05_2010a | BnaWAIT_01_2010a |
|---|---|---|---|---|---|
| A01 | BnaSGDH_03_2010a | 0.96**** | |||
| BnaDYDH_05_2010a | 0.97*** | 0.97*** | |||
| BnaWAIT_01_2010a | 0.97**** | 0.98**** | 0.99**** | ||
| BnaWAIT_01_2010b | 0.99**** | 1.00**** | 1.00**** | 0.97*** | |
| A02 | BnaSGDH_03_2010a | 0.95**** | |||
| BnaDYDH_05_2010a | 0.94* | 1.00 | |||
| BnaWAIT_01_2010a | 0.99**** | 0.99**** | 1.00**** | ||
| BnaWAIT_01_2010b | 1.00**** | 0.99**** | 1.00**** | 0.99**** | |
| A03 | BnaSGDH_03_2010a | 0.99**** | |||
| BnaDYDH_05_2010a | 0.97*** | 0.96** | |||
| BnaWAIT_01_2010a | 1.00**** | 0.99**** | 1.00**** | ||
| BnaWAIT_01_2010b | 1.00**** | 1.00**** | 0.98**** | 0.99**** | |
| A04 | BnaSGDH_03_2010a | 0.93**** | |||
| BnaDYDH_05_2010a | ------------- | 0.20 | |||
| BnaWAIT_01_2010a | 0.99**** | 0.97**** | 0.86**** | ||
| BnaWAIT_01_2010b | 1.00**** | 1.00**** | 0.98**** | 0.95**** | |
| A05 | BnaSGDH_03_2010a | 0.90**** | |||
| BnaDYDH_05_2010a | 0.20 | 1.00 | |||
| BnaWAIT_01_2010a | 0.94**** | 0.97**** | 1.00**** | ||
| BnaWAIT_01_2010b | 1.00**** | 0.99**** | 1.00**** | 0.96**** | |
| A06 | BnaSGDH_03_2010a | 0.84**** | |||
| BnaDYDH_05_2010a | 1.00 | 1.00 | |||
| BnaWAIT_01_2010a | 0.96**** | 0.94**** | 1.00**** | ||
| BnaWAIT_01_2010b | 0.97**** | 0.98**** | 1.00**** | 0.95**** | |
| A07 | BnaSGDH_03_2010a | 0.54 | |||
| BnaDYDH_05_2010a | 1.00 | -0.80 | |||
| BnaWAIT_01_2010a | 0.87**** | 0.76**** | 1.00**** | ||
| BnaWAIT_01_2010b | 1.00**** | 0.98**** | 0.98**** | 0.85**** | |
| A08 | BnaSGDH_03_2010a | 0.98**** | |||
| BnaDYDH_05_2010a | 0.70 | 0.80 | |||
| BnaWAIT_01_2010a | 0.79**** | 0.46**** | 0.58**** | ||
| BnaWAIT_01_2010b | 1.00**** | 0.98**** | 0.98**** | 0.64**** | |
| A09 | BnaSGDH_03_2010a | 0.75**** | |||
| BnaDYDH_05_2010a | 0.95*** | 0.93** | |||
| BnaWAIT_01_2010a | 0.86**** | 0.91**** | 0.97**** | ||
| BnaWAIT_01_2010b | 0.96**** | 0.99**** | 1.00**** | 0.92**** | |
| A10 | BnaSGDH_03_2010a | 0.97**** | |||
| BnaDYDH_05_2010a | 0.93** | 0.90 | |||
| BnaWAIT_01_2010a | 0.99**** | 0.99**** | 0.92**** | ||
| BnaWAIT_01_2010b | 1.00**** | 1.00**** | 0.98**** | 0.97**** | |
| C01 | BnaSGDH_03_2010a | 0.97**** | |||
| BnaDYDH_05_2010a | 1.00 | 0.93** | |||
| BnaWAIT_01_2010a | 0.99**** | 0.96**** | 0.97**** | ||
| BnaWAIT_01_2010b | 1.00**** | 0.99**** | 1.00**** | 0.97**** | |
| C02 | BnaSGDH_03_2010a | 0.64* | |||
| BnaDYDH_05_2010a | 0.70 | 1.00 | |||
| BnaWAIT_01_2010a | 0.99**** | 0.88**** | 0.99**** | ||
| BnaWAIT_01_2010b | 1.00**** | 0.99**** | 1.00**** | 0.96**** | |
| C03 | BnaSGDH_03_2010a | 0.91**** | |||
| BnaDYDH_05_2010a | 0.66 | 0.93**** | |||
| BnaWAIT_01_2010a | 0.96**** | 0.96**** | 0.95**** | ||
| BnaWAIT_01_2010b | 0.98**** | 1.00**** | 1.00**** | 0.96**** | |
| C04 | BnaSGDH_03_2010a | 0.86**** | |||
| BnaDYDH_05_2010a | 1.00 | 0.96** | |||
| BnaWAIT_01_2010a | 0.89**** | 0.96**** | 0.99**** | ||
| BnaWAIT_01_2010b | 0.99**** | 0.98**** | 1.00**** | 0.92**** | |
| C05 | BnaSGDH_03_2010a | 0.95**** | |||
| BnaDYDH_05_2010a | 0.70 | 1.00*** | |||
| BnaWAIT_01_2010a | 0.99**** | 0.98**** | 0.47*** | ||
| BnaWAIT_01_2010b | 1.00**** | 1.00**** | 1.00**** | 0.81**** | |
| C06 | BnaSGDH_03_2010a | 0.69* | |||
| BnaDYDH_05_2010a | 1.00 | 1.00 | |||
| BnaWAIT_01_2010a | 0.63**** | 0.82**** | 1.00**** | ||
| BnaWAIT_01_2010b | 0.97**** | 0.97**** | 1.00**** | 0.72**** | |
| C07 | BnaSGDH_03_2010a | 0.91**** | |||
| BnaDYDH_05_2010a | 1.00 | 0.78** | |||
| BnaWAIT_01_2010a | 0.99**** | 0.99**** | 0.99**** | ||
| BnaWAIT_01_2010b | 1.00**** | 0.98**** | 1.00**** | 0.99**** | |
| C08 | BnaSGDH_03_2010a | 0.96**** | |||
| BnaDYDH_05_2010a | 1.00 | 0.70 | |||
| BnaWAIT_01_2010a | 0.92**** | 0.96**** | 1.00**** | ||
| BnaWAIT_01_2010b | 1.00**** | 1.00**** | 1.00**** | 0.94**** | |
| C09 | BnaSGDH_03_2010a | 0.94**** | |||
| BnaDYDH_05_2010a | 1.00 | 1.00 | |||
| BnaWAIT_01_2010a | 0.99**** | 0.99**** | 0.98**** | ||
| BnaWAIT_01_2010b | 0.99**** | 1.00**** | 1.00**** | 0.99**** | |
The level of significance is shown by asterisks. Significance is shown as: * < 0.05; ** < 0.01; *** < 0.001; **** < 0.0001.