Table 4.
Detected EEJs from CLSTN1.
Gene name | Accession | EEJ pattern | Mapping pattern | Read ID | CN | MM | seq |
---|---|---|---|---|---|---|---|
CLSTN1 | NM_001009566 | 19:6-8 | 14 + 5 | NR12 | 32 | 0 | cctgggtggcaagggtgcg |
CLSTN1 | NM_001009566 | 19:6-8 | 14 + 5 | NR541 | 6 | 1 | cctgggtggcatgggtgcg |
CLSTN1 | NM_001009566 | 19:6-8 | 14 + 5 | NR3652 | 4 | 1 | cctgggtggcaaggatgcg |
CLSTN1 | NM_014944 | 18:5-7 | 14 + 5 | NR548 | 32 | 0 | cctgggtggcaagggtgcg |
CLSTN1 | NM_014944 | 18:5-7 | 14 + 5 | NR695 | 6 | 1 | cctgggtggcatgggtgcg |
CLSTN1 | NM_014944 | 18:5-7 | 14 + 5 | NR47 | 4 | 1 | cctgggtggcaaggatgcg |
NM_001009566 and NM_014944 are splicing isoforms of CLSTN1. The EEJ (19:6-8) from NM_001009566 is identical to the EEJ (18:5-7) from NM_014944.