Table 1.

Gene Ontology (GO) categories over-represented in groups of responsive and non-responsive genes

Group of genes	GO id	GO name	N genes	p-value	Enrichment ratio
Responsive genes with CpG islands	GO:0048513	Organ development	543	0	2.233
	GO:0003700	Transcription factor	323	0	2.198
	GO:0007399	Nervous system devel.	268	0	2.351
	GO:0007155	Cell adhesion	211	0	2.032
	GO:0006928	Cell motility	134	6.6027E-12	2.095
	GO:0009888	Tissue development	125	1.0458E-13	2.322
	GO:0031012	Extracellular matrix	115	3.245E-11	2.175
	GO:0001568	Blood vessel devel.	107	0	3.313
	GO:0007507	Heart development	85	2.8866E-15	3.122
	GO:0016055	Wnt receptor signaling	60	1.1637E-10	3.008
Non-responsive genes with CpG islands	GO:0015031	Protein transport	370	0	2.147
	GO:0006396	RNA processing	236	0	3.403
	GO:0006412	Translation	228	0	3.154
	GO:0044429	Mitochondrial part	206	4.4409E-16	2.475
	GO:0022403	Cell cycle phase	161	4.5759E-10	2.141
	GO:0016887	ATPase activity	158	1.3717E-10	2.278
	GO:0008380	RNA splicing	133	0	5.358
	GO:0006281	DNA repair	124	1.6187E-13	3.088
	GO:0006260	DNA replication	92	1.5896E-09	2.864
	GO:0006457	Protein folding	78	6.4245E-07	2.484